| layout | id | title | contact | status | fail_mode | implementations | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
rule |
GORULE:0000020 |
Automatic repair of annotations to merged or obsoleted terms |
Implemented |
soft |
|
Ontology operations such as term merges and obsoletions may be out of sync with annotation releases. Each GO entry T in the GAF is checked to see if it corresponds to a valid (non-obsolete) term in the ontology. If not, metadata for other terms is checked. If the term has been merged into a term S (i.e. S has alt_id of T) then T is replaced by S in the GAF line.