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Fix assignemnt of array ID variable
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gdevenyi committed Oct 10, 2017
1 parent 4b34d21 commit 739f164
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions bin/qbatch
Original file line number Diff line number Diff line change
Expand Up @@ -91,7 +91,7 @@ LSF_HEADER_TEMPLATE = """
#BSUB {o_options}
{env}
{header_commands}
ARRAY_IND=LSB_JOBINDEX
ARRAY_IND=$LSB_JOBINDEX
""".strip()


Expand Down Expand Up @@ -345,8 +345,8 @@ if __name__ == "__main__":
group.add_argument(
"-b", default=SYSTEM, choices=['pbs', 'sge', 'lsf', 'local'],
help="""The type of queueing system to use. 'pbs' and 'sge' both make
calls to qsub to submit jobs. 'local' runs the entire command list
(without chunking) locally.""")
calls to qsub to submit jobs. 'lsf' makes calls to bsub. 'local' runs
the entire command list (without chunking) locally.""")
group.add_argument(
"--env", choices=['copied', 'batch', 'none'], default='copied',
help="""Determines how your environment is propagated when your
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