From 3ad3c3c52a5be6a9d905620d7deb598ac1364f82 Mon Sep 17 00:00:00 2001
From: Wei Ji <23487320+weiji14@users.noreply.github.com>
Date: Sun, 14 Mar 2021 17:01:55 +1300
Subject: [PATCH 1/2] Setup poetry in pyproject.toml

Translating the Python specific dependencies inside
the conda environment.yml file into poetry.
Project metadata and required dependencies
are copied from setup.py. There are also optional
dependencies for building sphinx documentation
and development specific dependencies for testing.
---
 .gitignore     |  1 +
 pyproject.toml | 44 ++++++++++++++++++++++++++++++++++++++++++++
 2 files changed, 45 insertions(+)

diff --git a/.gitignore b/.gitignore
index 7e3800a3b1c..0d08c70ef29 100644
--- a/.gitignore
+++ b/.gitignore
@@ -11,6 +11,7 @@ dist/
 *.egg-info/
 .eggs/
 MANIFEST
+poetry.lock
 
 # Unit test / coverage reports
 .cache
diff --git a/pyproject.toml b/pyproject.toml
index b147a80a911..3f7223ae519 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,3 +1,47 @@
+[tool.poetry]
+name = "pygmt"
+version = "0.3.1"
+description = "A Python interface for the Generic Mapping Tools"
+authors = ["The PyGMT Developers"]
+license = "BSD License"
+
+[tool.poetry.dependencies]
+myst-parser = {version = "*", optional = true}
+netCDF4 = "*"
+numpy = "*"
+packaging = "*"
+pandas = "*"
+python = "^3.7"
+sphinx = {version = "*", optional = true}
+sphinx-copybutton = {version = "*", optional = true}
+sphinx-gallery = {version = "*", optional = true}
+sphinx_rtd_theme = {version = "0.4.3", optional = true}
+xarray = "*"
+
+[tool.poetry.dev-dependencies]
+black = "*"
+blackdoc = "*"
+codecov = "*"
+coverage = {extras = ["toml"], version = "*"}
+docformatter = "*"
+flake8 = "*"
+ipython = "*"
+isort = ">=5"
+jupyter = "*"
+make = "*"
+matplotlib = "*"
+pylint = "*"
+pytest-cov = "*"
+pytest-mpl = "*"
+pytest = ">=6.0"
+
+[tool.poetry.extras]
+docs = ["myst-parser", "sphinx", "sphinx-copybutton", "sphinx-gallery", "sphinx_rtd_theme"]
+
+[build-system]
+requires = ["poetry-core>=1.0.0"]
+build-backend = "poetry.core.masonry.api"
+
 [tool.coverage.run]
 omit = ["*/tests/*", "*pygmt/__init__.py"]
 

From 9e8820dee578fc36005a8ae9b47bcf7b5ad7f792 Mon Sep 17 00:00:00 2001
From: Wei Ji <23487320+weiji14@users.noreply.github.com>
Date: Sun, 14 Mar 2021 17:08:13 +1300
Subject: [PATCH 2/2] Let ci_tests use conda for non-Python deps and poetry for
 Python deps

Only installing GMT and make via conda, plus
poetry just to make things easy. The PyGMT
package and all the necessary Python
dependencies are installed using poetry.
---
 .github/workflows/ci_tests.yaml | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/ci_tests.yaml b/.github/workflows/ci_tests.yaml
index 0ac19e209a4..ce3a7717219 100644
--- a/.github/workflows/ci_tests.yaml
+++ b/.github/workflows/ci_tests.yaml
@@ -79,7 +79,7 @@ jobs:
 
       # Install GMT and other required dependencies from conda-forge
       - name: Install dependencies
-        run: conda env update --file environment.yml
+        run: conda install gmt=6.1.1 make poetry
 
       # Show installed pkg information for postmortem diagnostic
       - name: List installed packages
@@ -105,9 +105,7 @@ jobs:
 
       # Install the package that we want to test
       - name: Install the package
-        run: |
-          python setup.py sdist --formats=zip
-          pip install dist/*
+        run: poetry install --extras docs
 
       # Run the tests
       - name: Test with pytest