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HiDiH - Hub for Innovations in Digital Health

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  1. ssam ssam Public archive

    Python 28 11

  2. htslib-js htslib-js Public

    CMake 10 1

  3. PanCanQC PanCanQC Public

    Perl 8 3

  4. YAPSA YAPSA Public

    R 7

  5. sainsc sainsc Public

    Segmentation-free Analysis of In Situ Capture data

    Python 4

  6. CRC_scRNAseq CRC_scRNAseq Public

    Code for analysing single-cell data from colorectal cancer organoids

    Jupyter Notebook 3 4

Repositories

Showing 10 of 36 repositories
  • sainsc Public

    Segmentation-free Analysis of In Situ Capture data

    HiDiHlabs/sainsc’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Nov 29, 2024
  • SpatialLeiden Public

    Implementation of multiplex Leiden for analysis of spatial omics data

    HiDiHlabs/SpatialLeiden’s past year of commit activity
    Python 3 MIT 0 1 0 Updated Nov 28, 2024
  • SpatialLeiden-Study Public
    HiDiHlabs/SpatialLeiden-Study’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 25, 2024
  • ovrl.py Public

    A python tool to investigate cell overlaps in imaging-based spatial transcriptomics data.

    HiDiHlabs/ovrl.py’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Nov 12, 2024
  • multiSPAETI Public

    Implementation of MULTISPATI-PCA in Python

    HiDiHlabs/multiSPAETI’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 1, 2024
  • ssam Public archive
    HiDiHlabs/ssam’s past year of commit activity
    Python 28 AGPL-3.0 11 5 0 Updated Oct 12, 2024
  • umi_alignment Public

    A snakemake pipeline for aligning UMI based WGS data and QC metrics associated with it

    HiDiHlabs/umi_alignment’s past year of commit activity
    Python 1 MIT 0 7 1 Updated Oct 7, 2024
  • sainsc-study Public
    HiDiHlabs/sainsc-study’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 20, 2024
  • siNET_omics_analysis Public

    siNET_omics_analysis

    HiDiHlabs/siNET_omics_analysis’s past year of commit activity
    0 MIT 0 0 0 Updated Apr 22, 2024
  • sonar Public

    Analytic and generative algorithm on co-occurrences in 2d maps

    HiDiHlabs/sonar’s past year of commit activity
    0 MIT 0 0 0 Updated Feb 14, 2024
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