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taxon-swaps.json5
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taxon-swaps.json5
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{
"Acanthascus dowlingi": {
taxonNames: {
"round lipped boot sponge": {
type: "commonName",
},
"Staurocalyptus dowlingi": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "424717",
},
"Antho graceae": {
taxonNames: {
"red-brown encrusting sponge": {
type: "commonName",
},
"Anthoarcuata graceae": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "459794",
},
"Antho karykina": {
taxonNames: {
"bright red sponge": {
type: "commonName",
},
"Plocamia karykina": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "345142",
},
"Antiopella fusca": {
taxonNames: {
"white-and-orange-tipped nudibranch": {
type: "commonName",
},
"Janolus fuscus": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "47460",
}
},
iNaturalistTaxonId: "886884",
},
"Apata pricei": {
taxonNames: {
"Price's aeolid": {
type: "commonName",
},
"Flabellina pricei": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "50456",
},
},
iNaturalistTaxonId: "631469",
},
"Ascidia columbiana": {
taxonNames: {
"sea blisters": {
type: "commonName",
},
"Ascidia columbiana / A. callosa": {
resolvedBy: "AB",
notes: "callosa is 566446 with 3 obs",
},
},
iNaturalistTaxonId: "428617",
},
"Asemichthys taylori": {
taxonNames: {
"spinynose sculpin": {
type: "commonName",
},
"Radulinus taylori": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "492673",
},
},
iNaturalistTaxonId: "172639",
},
"Balanus glandula": {
taxonNames: {
"common acorn barnacles": {
type: "commonName",
},
"Balanus glandula/Balanus crenatus": {
resolvedBy: "AB",
notes: "crenatus is 117672 with 195 obs",
},
},
iNaturalistTaxonId: "81610",
},
"Bathyagonus infraspinatus": {
taxonNames: {
"spinycheek starsnout": {
type: "commonName",
},
"Bathyagonus infraspinata": {
resolvedBy: "AB",
notes: "misspelling in obs record",
},
},
iNaturalistTaxonId: "525797",
},
"Chaetopterus variopedatus": {
taxonNames: {
"U-shaped parchment tubeworm": {
type: "commonName",
},
"Chaetopterus": {
resolvedBy: "AS",
notes: "PMLS records Chaetopterus complex but Leslie has indicated this is the Chaetopterus variopedatus complex.",
},
"Chaeopterus": {
resolvedBy: "AS",
notes: "Persistent PMLS typo in Valdes"
}
},
iNaturalistTaxonId: "216631",
},
Corallinoideae: {
taxonNames: {
"articulated coralline algae": {
type: "commonName",
},
"Bossiella, Calliarthron, Corallina, Serraticardia": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "840800",
},
"Coryphella verrucosa": {
taxonNames: {
"red-gilled nudibranch": {
type: "commonName",
},
"Flabellina verrucosa": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "50461",
notes: "Swap is now inactive, since verrucosa -> pseudoverrucosa in PMLS of 2021-2-24"
},
},
iNaturalistTaxonId: "633193",
},
"Cumathamnion decipiens": {
taxonNames: {
"winged rib": {
type: "commonName",
},
"Delesseria decipiens": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "429953",
},
},
iNaturalistTaxonId: "496909",
},
"Didemnidae": {
taxonNames: {
"white glove leather": {
type: "commonName",
},
"Didemnum/Trididemnum": {
resolvedBy: "AB",
notes: "PMLS resolution",
criticalNotes: "Didemnum spp. in our dive log data for Galiano Island is most likely via our Didemnun/Trididemnum category. This category has traditionally been used for encrusting whitish compound tunicate that often forms large sheets . We have followed this procedure based upon Gretchen Lambert's advice. An impossible task to go further in the field and without specimen sampling."
}
},
iNaturalistTaxonId: "54931"
},
Ectocarpales: {
taxonNames: {
"brown tuft": {
type: "commonName",
},
"Ectocarpus, Feldmannia, Hincksia, Pilayella": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "117795",
},
"Ectopleura crocea": {
taxonNames: {
"bushy pink-mouth hydroid": {
type: "commonName",
},
"Pinauay crocea": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "63649",
},
},
iNaturalistTaxonId: "324497",
},
"Ectopleura marina": {
taxonNames: {
"solitary pink-mouth hydroid": {
type: "commonName",
},
"Pinauay marina": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "63648",
},
},
iNaturalistTaxonId: "492142",
},
"Epigamia magna": {
taxonNames: {
"noble necklace-worm": {
type: "commonName",
},
"Autolytus magnus": {
resolvedBy: "AB",
notes: "WoRMS",
},
},
iNaturalistTaxonId: "628178",
},
"Fucus distichus": {
taxonNames: {
rockweed: {
type: "commonName",
},
"Fucus gardneri": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "69155",
},
"Gadus chalcogrammus": {
taxonNames: {
"walleye pollock": {
type: "commonName",
},
"Alaska Pollock": {
type: "commonName",
},
"Theragra chalcogramma": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "180034",
}
},
iNaturalistTaxonId: "614161",
},
"Glebocarcinus oregonensis": {
taxonNames: {
"pygmy rock crab": {
type: "commonName",
},
"Cancer oregonensis": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "429951",
},
"Henricia aspera aspera": {
taxonNames: {
"ridged blood star": {
type: "commonName",
},
"Henricia aspera aspera": {
resolvedBy: "AB",
notes: "Added to iNat, swap pending update"
},
},
iNaturalistTaxonId: "1265168",
},
"Henricia leviuscula": {
taxonNames: {
"blood star": {
type: "commonName",
},
"Henricia leviuscula leviuscula": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "47664",
},
"Coryphella trophina": {
taxonNames: {
"red flabellina": {
type: "commonName",
},
"Flabellina triophina": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "50459",
},
"Himatina trophina": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "633561",
}
},
iNaturalistTaxonId: "1376715",
},
"Integripelta bilabiata": {
taxonNames: {
"derby hat bryozoan": {
type: "commonName",
},
"Eurystomella bilabiata": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "334556",
},
"Lottia scutum": {
taxonNames: {
"plate limpet": {
type: "commonName",
},
"Tectura scutum": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "338322",
},
},
iNaturalistTaxonId: "129962",
},
"Membranipora villosa": {
taxonNames: {
"kelp-encrusting bryozoan": {
type: "commonName",
},
"Membranipora serrilamella": {
resolvedBy: "AB",
notes: "Incredible",
},
},
iNaturalistTaxonId: "360867",
},
"Metacarcinus gracilis": {
taxonNames: {
"Graceful Rock Crab": {
type: "commonName",
},
"Cancer gracilis": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "116721",
},
"Metacarcinus magister": {
taxonNames: {
"Dungeness crab": {
type: "commonName",
},
"Cancer magister": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "295526"
},
},
iNaturalistTaxonId: "63697",
},
"Mopalia ciliata": {
taxonNames: {
"northern hairy chiton": {
type: "commonName"
},
"Mopalia kennerelyi": {
type: "typo",
resolvedBy: "AB",
notes: "Remnant spelling mistake in version 18 of PMLS catalogue"
},
"Mopalia kennerlyi": {
type: "typo",
resolvedBy: "AB",
notes: "Yet another PMLS mispelling in Valdes"
},
"Mopalia kennerleyi": {
resolvedBy: "AS",
notes: "And the whole thing is gone",
oldiNaturalistTaxonId: "360858"
}
},
iNaturalistTaxonId: "117634"
},
"Neoesperiopsis rigida": {
taxonNames: {
"orange finger sponge": {
type: "commonName",
},
"Amphilectus rigida": {
resolvedBy: "AB",
notes: "iNat also has 59878-Isodictya-rigida with no obs",
},
},
iNaturalistTaxonId: "367052",
},
"Neosabellaria cementarium": {
taxonNames: {
"cemented sandmason tubeworm": {
type: "commonName",
},
"Sabellaria cementarium": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "339237",
},
"Neverita lewisii": {
taxonNames: {
"Lewis's moonsnail": {
type: "commonName",
},
"Euspira lewisii": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "116659",
},
},
iNaturalistTaxonId: "447427",
},
"Orienthella trilineata": {
taxonNames: {
"three-lined nudibranch": {
type: "commonName",
},
"Flabellina trilineata": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "47430",
},
},
iNaturalistTaxonId: "764704",
},
"Osmundea spectabilis": {
taxonNames: {
"sea laurel": {
type: "commonName",
},
"Laurencia spectabilis": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "339015",
},
"Pentidotea resecata": {
taxonNames: {
"Eelgrass Isopod": {
type: "commonName",
},
"Idotea resecata": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "261239"
},
},
iNaturalistTaxonId: "141842",
},
"Plocamium cartilagineum pacificum": {
taxonNames: {
"sea braid": {
type: "commonName",
},
"Plocamium pacificum": {
resolvedBy: "AB",
},
"Plocamium cartilageneum pacificum": {
resolvedBy: "AS",
scope: "typo"
}
},
iNaturalistTaxonId: "339051",
},
"Podocerus cristatus": {
taxonNames: {
"neon sea flea": {
type: "commonName",
},
"Podoceras cristatus": {
resolvedBy: "AB",
notes: "misspelling in obs record",
},
},
iNaturalistTaxonId: "60636",
},
"Primavelans insculpta": {
taxonNames: {
"fluted bryozoan": {
type: "commonName",
},
"Hippodiplosia insculpta": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "485347",
},
},
iNaturalistTaxonId: "429861",
},
"Pyropia nereocystis": {
taxonNames: {
"bull-kelp nori": {
type: "commonName",
},
"Porphyra nereocystis": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "447086",
},
},
iNaturalistTaxonId: "542165",
},
"Rhacochilus vacca": {
taxonNames: {
"pile perch": {
type: "commonName",
},
"Damalichthys vacca": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "111616",
},
"Saccharina bongardiana": {
taxonNames: {
"dark-brown wrack kelp": {
type: "commonName",
},
"Laminaria bongardiana": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "429869",
},
},
iNaturalistTaxonId: "465193",
},
"Schuchertinia milleri": {
taxonNames: {
"hedge-hog hydroid": {
type: "commonName",
},
"Clavactinia milleri": {
resolvedBy: "AB",
notes: "Guess based on proximity in WoRMS, correlation in common name",
},
},
iNaturalistTaxonId: "854771",
},
"Trichotropis cancellata": {
taxonNames: {
"checkered hairysnail": {
type: "commonName",
},
"Trichotropsis cancellata": {
type: "typo",
resolvedBy: "AS"
}
},
iNaturalistTaxonId: "447177",
},
"Tritonia tetraquetra": {
taxonNames: {
"orange-peel nudibranch": {
type: "commonName",
},
"Tritonia gigantea": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "545545"
},
"Amsinckia menziesii intermedia": {
taxonNames: {
"Rancher's fiddleneck": {
type: "commonName",
},
"Amsinckia intermedia": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "49141"
},
"Anthoceros punctatus": {
taxonNames: {
"Dotted Hornwort": {
type: "commonName",
},
"Aspiromitus punctatus": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "158432"
},
"Atriplex dioica": {
taxonNames: {
"Thickleaf Orach": {
type: "commonName",
},
"Atriplex subspicata": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "75701"
},
"Racomitrium heterostichum": {
taxonNames: {
"Yellow-green Rock Moss": {
type: "commonName",
},
"Bucklandiella heterosticha": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "167683"
},
"Racomitrium macounii": {
taxonNames: {
"Macoun's Rock Moss": {
type: "commonName",
},
"Bucklandiella macounii": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "167686"
},
"Carex leporina": {
taxonNames: {
"Oval Sedge": {
type: "commonName",
},
"Carex ovalis": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "160051",
},
},
iNaturalistTaxonId: "76067"
},
"Chiloscyphus pallescens fragilis": {
taxonNames: {
"Chiloscyphus fragilis": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "239995"
},
"Cymathaere triplicata": {
taxonNames: {
"Three-ribbed Kelp": {
type: "commonName",
},
"Cymathere triplicata": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "462185",
},
},
iNaturalistTaxonId: "429947"
},
"Epilobium hallianum": {
taxonNames: {
"Hall's Willowherb": {
type: "commonName",
},
"Epilobium halleanum": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "162361",
},
},
iNaturalistTaxonId: "76831"
},
"Filago germanica": {
taxonNames: {
"Common Cudweed": {
type: "commonName",
},
"Filago vulgaris": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "62004",
},
},
iNaturalistTaxonId: "634625"
},
"Reynoutria japonica": {
taxonNames: {
"Japanese Knotweed": {
type: "commonName",
},
"Fallopia japonica": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "77130",
},
},
iNaturalistTaxonId: "914922"
},
"Reynoutria sachalinensis": {
taxonNames: {
"Giant Knotweed": {
type: "commonName",
},
"Fallopia sachalinensis": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "77131",
},
},
iNaturalistTaxonId: "593040"
},
"Grindelia hirsutula": {
taxonNames: {
"Hairy Gumweed": {
type: "commonName",
},
"Grindelia hirsutula hirsutula": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "55383",
},
},
iNaturalistTaxonId: "55364"
},
"Physcomitrium pyriforme": {
taxonNames: {
"Common Bladder Moss": {
type: "commonName",
},
"Physcomitrium megalocarpum": {
resolvedBy: "AB",
notes: "Found as synonym in GBIF"
},
},
iNaturalistTaxonId: "154195"
},
"Potentilla anserina": {
taxonNames: {
"Common Silverweed": {
type: "commonName",
},
"Potentilla egedii": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "62216"
},
"Poterium polygamum": {
taxonNames: {
"Poterium sanguisorba polygamum": {
resolvedBy: "AB",
notes: "Poterium sanguisorba has become Sanguisorba minor - pretty confusing",
oldiNaturalistTaxonId: "78744",
},
},
iNaturalistTaxonId: "55736"
},
"Salicornia depressa": {
taxonNames: {
"Virginia Glasswort": {
type: "commonName",
},
"Salicornia virginica": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "63367",
},
},
iNaturalistTaxonId: "78930"
},
"Salicornia perennis": {
taxonNames: {
"Perennial Glasswort": {
type: "commonName",
},
"Sarcocornia perennis": {
resolvedBy: "AB",
oldiNaturalistTaxonId: "601046",
},
},
iNaturalistTaxonId: "78932"
},
"Silene latifolia alba": {
taxonNames: {
"White Campion": {
type: "commonName",
},
"Silene alba": {
resolvedBy: "AB",
notes: "Unclear whether Silene latifolia itself is meant",
oldiNaturalistTaxonId: "79109",
},
},
iNaturalistTaxonId: "128683"
},
"Solanum nodiflorum nutans": {
taxonNames: {
"Small-flowered Nightshade": {
type: "commonName",
},
"Solanum americanum nodiflorum": {
resolvedBy: "AB",
notes: "I think iNat's taxonomy is probably screwed up here, showing two parallel 'nutans' ssp"
},
},
iNaturalistTaxonId: "414039"
},
"Stachys chamissonis cooleyae": {
taxonNames: {
"Cooley's Hedge-Nettle": {
type: "commonName",
},
"Stachys cooleyae": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "52627"
},
"Torreyochloa pallida pauciflora": {
taxonNames: {
"Weak Manna Grass": {
type: "commonName",
},
"Torreyochloa pauciflora": {
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "81431"
}, // Beginning PMLS records here
"Melanochlamys diomedea": {
taxonNames: {
"Albatross Aglaja": {
type: "commonName",
},
"Aglaja diomedea": {
resolvedBy: "AB",
notes: "This is current in WoRMS, ITIS lags",
oldiNaturalistTaxonId: "49845",
},
},
iNaturalistTaxonId: "345334"
},
"Celleporina robertsoniae": {
taxonNames: {
"Orange Bryozoan": {
type: "commonName",
},
"Celleporina robersoniae": {
notes: "Misspelling in Mayne",
resolvedBy: "AB",
},
},
iNaturalistTaxonId: "485340"
},
"Leptasterias hexactis": {
taxonNames: {
"Six-rayed Star": {
type: "commonName",
},
"Leptasterias aequalis": {
resolvedBy: "AB",
notes: "iNaturalist note: I realize this will probably be unpleasant to some, particularly those of us in the Bay Area, since the 4th edition Light's specifically mentions that L. hexactis is the invalid synonym, but this is how WoRMS treats these two species, and that's the authority we're trying to follow for marine inverts.",
oldiNaturalistTaxonId: "120883",
},
},
iNaturalistTaxonId: "117691"
},
"Puncturella cucullata": {
taxonNames: {
"Hooded Puncturella": {
type: "commonName",
},
"Cranopsis cucullata": {
resolvedBy: "AB",
notes: "This is current in WoRMS, ITIS lags",
oldiNaturalistTaxonId: "447404",
},
},
iNaturalistTaxonId: "904312"
},
"Oxydromus pugettensis": {
taxonNames: {
"Bat Star Worm": {
type: "commonName",
},
"Ophiodromus pugettensis": {
resolvedBy: "AB",
notes: "This is current in WoRMS, ITIS lags",
oldiNaturalistTaxonId: "339266",
},
},
iNaturalistTaxonId: "494514"
},
"Paciocinebrina interfossa": {
taxonNames: {
"Sculptured Rocksnail": {
type: "commonName",
},
"Ocinebrina interfossa": {
resolvedBy: "AB",
notes: "This is current in WoRMS, ITIS lags",
oldiNaturalistTaxonId: "129928",
},
},
iNaturalistTaxonId: "910801"
},
"Paciocinebrina lurida": {
taxonNames: {
"Lurid Rocksnail": {
type: "commonName",
},
"Ocinebrina lurida": {
resolvedBy: "AB",
notes: "This is current in WoRMS, ITIS lags",
oldiNaturalistTaxonId: "129927",
},
},
iNaturalistTaxonId: "910800"
},
"Ophiura luetkenii": {
taxonNames: {
"Ophiura lüetkenii": {
notes: "Misspelling in PMLS and iNat",
resolvedBy: "AB",
},
"Ophiura lutkeni": {
notes: "Misspelling in RBCM",
resolvedBy: "AB",
}
},
iNaturalistTaxonId: "255865"
},
"Cistenides granulata": {
taxonNames: {
"Pectinaria granulata": {
resolvedBy: "AB",
notes: "WoRMS says that Pectinaria is accepted but Cistenides is preferred"
},
},
iNaturalistTaxonId: "464624"
},
"Stenogramma interruptum": {
taxonNames: {
"Stenogramma interrupta": {
resolvedBy: "AB",
notes: "This appears to be incorrect Latin but this is how it currently is in WoRMS"
},
},
iNaturalistTaxonId: "339049"
}, // From here Mayne Animalia
"Anas crecca carolinensis": {
taxonNames: {
"Anas carolinensis": {
resolvedBy: "AB",
notes: "Avibase and modern taxonomic sources support 'Anas carolinensis', however, iNaturalist is based on odd sources such as 'Clements checklist' and hence eBird which still stick to crecca (as does AOS)"
},
},
iNaturalistTaxonId: "123676"
},
"Anser caerulescens": {
taxonNames: {
"Chen caerulescens": {
resolvedBy: "AB",
notes: "WP: The AOU and BirdLife International place this species and the other 'white geese' in the Chen genus, while other authorities follow the traditional treatment of placing these species in the 'gray goose' genus Anser"
},
},
iNaturalistTaxonId: "558426"
},
"Glaucidium gnoma californicum": {
taxonNames: {
"Glaucidium californicum": {
resolvedBy: "AB",
notes: "WP: Some taxonomic authorities, including the IOU separates this species from [gnoma], while others, such as the AOU, do not. Results from DNA sequence comparisons of cytochrome-b have been weak and inconclusive."
},
},
iNaturalistTaxonId: "237013"
},
"Peromyscus maniculatus": {
taxonNames: {
"Peromyscus maniculatus angustus": {
authority: "Hall, 1932",
resolvedBy: "AB",
notes: "ITIS considers this 'invalid - junior synonym' and it is not in MDD"
},
},
iNaturalistTaxonId: "44396"
},
"Cortinicara gibbosa": {
taxonNames: {
"Cortinicaria gibbosa": {
resolvedBy: "AB",
notes: "Misspelling in Mayne Animalia"
},
},
iNaturalistTaxonId: "174190"
},
"Laqueus californianus": {
taxonNames: {
"Laqueus californicus": {
resolvedBy: "AB",
notes: "Misspelling in Mayne Animalia"
},
},
iNaturalistTaxonId: "551350"
}, // From here Mayne Fungi
"Arthopyrenia plumbaria": {
taxonNames: {
"Arthopyrenia plumbea": {
resolvedBy: "AB",
notes: "Misspelling in Mayne Animalia"
},
},
iNaturalistTaxonId: "214339"
},
"Pyrenodesmia olivacea": {
taxonNames: {
"Caloplaca olivacea": {
resolvedBy: "AB",
notes: "Swap from Mayne Animalia, listed as Caloplaca olivacea ined. but actually in http://www.indexfungorum.org/names/namesrecord.asp?RecordID=403029"
},
},
iNaturalistTaxonId: "940105"
},
"Circinaria caesiocinerea": {