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CHANGELOG.md

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viash_project_template 0.3.0

  • Update to Viash 0.8.2

    • demo_pipeline is now built from src/workflows/demo_pipeline
    • State management overhaul
    • Use of helper functions (dependencies) from vsh_utils

viash_project_template 0.2.0

  • Update to Viash 0.7.1.

  • Replace 'underscore' (like viash_build) commands with equivalent 'ns' command (viash ns build).

  • Use slim versions of the previously used Docker images.

  • Update GitHub Actions.

viash_project_template 0.1.0

First release of the project template repository.

Components:

  • src/demo/remove_comments: A Bash-based component to remove all lines starting with a comment character #.

  • src/demo/take_column: A Python-based component to extract a specific column from a TSV file.

  • src/demo/combine_columns: An R-based component to combine multiple TSV files into one.

Pipelines:

  • workflows/demo_pipeline/main.nf: A demo pipeline which uses abovementioned components.