-
Update to Viash 0.8.2
demo_pipeline
is now built fromsrc/workflows/demo_pipeline
- State management overhaul
- Use of helper functions (dependencies) from
vsh_utils
-
Update to Viash 0.7.1.
-
Replace 'underscore' (like
viash_build
) commands with equivalent 'ns' command (viash ns build
). -
Use slim versions of the previously used Docker images.
-
Update GitHub Actions.
First release of the project template repository.
Components:
-
src/demo/remove_comments
: A Bash-based component to remove all lines starting with a comment character#
. -
src/demo/take_column
: A Python-based component to extract a specific column from a TSV file. -
src/demo/combine_columns
: An R-based component to combine multiple TSV files into one.
Pipelines:
workflows/demo_pipeline/main.nf
: A demo pipeline which uses abovementioned components.