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DESCRIPTION
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Package: clustra
Version: 0.2.1
Date: 2024-01-04
Title: Clustering Longitudinal Trajectories
Authors@R: c(person("George", "Ostrouchov", role = c("aut", "cre"), email =
person("David", "Gagnon", role = "aut"),
person("Hanna", "Gerlovin", role = "aut"),
person("Chen", "Wei-Chen", role = "ctb"),
person("Schmidt", "Drew", role = "ctb"),
person("Oak Ridge National Laboratory", role="cph"),
person("U.S. Department of Veteran's Affairs", role="fnd",
comment="Project: Million Veteran Program Data Core")
)
Depends:
R (>= 3.5.0)
Imports:
data.table,
graphics,
grDevices,
methods,
mgcv,
MixSim,
parallel,
stats
Suggests:
haven,
knitr,
rmarkdown
Description: Clusters longitudinal trajectories over time (can be unequally
spaced, unequal length time series and/or partially overlapping series) on
a common time axis. Performs k-means clustering on a single continuous
variable measured over time, where each mean is defined by a thin plate
spline fit to all points in a cluster. Distance is MSE across trajectory
points to cluster spline. Provides graphs of derived cluster splines,
silhouette plots, and Adjusted Rand Index evaluations of the number
of clusters. Scales well to large data with multicore parallelism available
to speed computation.
LazyLoad: yes
License: BSD 2-clause License + file LICENSE
Encoding: UTF-8
Maintainer: George Ostrouchov <[email protected]>
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
URL: https://github.com/MVP-CHAMPION/clustra
BugReports: https://github.com/MVP-CHAMPION/clustra/issues
VignetteBuilder: knitr
LazyData: true
LazyDataCompression: xz