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db_import.py
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#!flask/bin/python
from app.models import Food, FoodKey
from app import db
from unidecode import unidecode
from fractions import Fraction
def convertUni(word):
return unidecode(unicode(word,'utf-8'))
def convertMixedFraction(mixedFrac):
mixedFrac = mixedFrac.split()
output = 0
for i in mixedFrac:
output += Fraction(i)
return output
def createFood(food_item_info):
#create tag
foodName = food_item_info[2].replace('&','&')
foodName = convertUni(foodName)
foodDetail = food_item_info[3].replace('&','&')
foodDetail = convertUni(foodDetail)
foodSource = food_item_info[4].replace('&','&')
foodSource = convertUni(foodSource)
tag = foodName + " " + foodDetail
tagList = tag.split()
for i in range(len(tagList)):
tagList[i] = tagList[i].lower().rstrip(',')
tagList = list(set(tagList))
space = " "
tag = space.join(tagList)
tag = " "+tag+" "
#size of this list is 25
food_item = Food(mainType = food_item_info[0]
,type = food_item_info[1]
,food = foodName
,detail = foodDetail
,source = foodSource
,amount = float(convertMixedFraction(str(food_item_info[5])))
,unit = food_item_info[6]
,gram = float(food_item_info[7])
,tag = tag
#nutrients per the stated gram
,cal_kcal = float(food_item_info[8])
,calFat_kcal = float(food_item_info[9])
,fat_g = float(food_item_info[10])
,fat_pct = float(food_item_info[11])
,saturFat_g = float(food_item_info[12])
,polyunFat_g = float(food_item_info[13])
,monounFat_g = float(food_item_info[14])
,chol_mg = float(food_item_info[15])
,sodium_mg = float(food_item_info[16])
,carb_g = float(food_item_info[17])
,fiber_g = float(food_item_info[18])
,sugar_g = float(food_item_info[19])
,protein_g = float(food_item_info[20])
,vitA_pct = float(food_item_info[21])
,vitC_pct = float(food_item_info[22])
,calcium_pct = float(food_item_info[23])
,iron_pct = float(food_item_info[24])
,t0Water_g= float(food_item_info[25])
,t0Energy_kcal= float(food_item_info[26])
,t0Energy_kj= float(food_item_info[27])
,t0Protein_g= float(food_item_info[28])
,t0TotalLipidFat_g= float(food_item_info[29])
,t0Carbohydrate_ByDifference_g= float(food_item_info[30])
,t0Fiber_TotalDietary_g= float(food_item_info[31])
,t0Sugars_Total_g= float(food_item_info[32])
,t0Sucrose_g= float(food_item_info[33])
,t0GlucoseDextrose_g= float(food_item_info[34])
,t0Fructose_g= float(food_item_info[35])
,t0Lactose_g= float(food_item_info[36])
,t0Maltose_g= float(food_item_info[37])
,t0Galactose_g= float(food_item_info[38])
,t0Starch_g= float(food_item_info[39])
,t0AdjustedProtein_g= float(food_item_info[40])
,t1Calcium_Ca_mg= float(food_item_info[41])
,t1Iron_Fe_mg= float(food_item_info[42])
,t1Magnesium_Mg_mg= float(food_item_info[43])
,t1Phosphorus_P_mg= float(food_item_info[44])
,t1Potassium_K_mg= float(food_item_info[45])
,t1Sodium_Na_mg= float(food_item_info[46])
,t1Zinc_Zn_mg= float(food_item_info[47])
,t1Copper_Cu_mg= float(food_item_info[48])
,t1Manganese_Mn_mg= float(food_item_info[49])
,t1Selenium_Se_mcg= float(food_item_info[50])
,t1Fluoride_F_mcg= float(food_item_info[51])
,t2VitaminC_TotalAscorbicAcid_mg= float(food_item_info[52])
,t2Thiamin_mg= float(food_item_info[53])
,t2Riboflavin_mg= float(food_item_info[54])
,t2Niacin_mg= float(food_item_info[55])
,t2PantothenicAcid_mg= float(food_item_info[56])
,t2VitaminB_6_mg= float(food_item_info[57])
,t2Folate_Total_mcg= float(food_item_info[58])
,t2FolicAcid_mcg= float(food_item_info[59])
,t2Folate_Food_mcg= float(food_item_info[60])
,t2Folate_DFE_mcg_DFE= float(food_item_info[61])
,t2Choline_Total_mg= float(food_item_info[62])
,t2Betaine_mg= float(food_item_info[63])
,t2VitaminB_12_mcg= float(food_item_info[64])
,t2VitaminB_12_Added_mcg= float(food_item_info[65])
,t2VitaminA_IU_IU= float(food_item_info[66])
,t2VitaminA_RAE_mcg_RAE= float(food_item_info[67])
,t2Retinol_mcg= float(food_item_info[68])
,t2VitaminE_alpha_tocopherol__mg= float(food_item_info[69])
,t2VitaminE_Added_mg= float(food_item_info[70])
,t2Tocopherol_Beta_mg= float(food_item_info[71])
,t2Tocopherol_Gamma_mg= float(food_item_info[72])
,t2Tocopherol_Delta_mg= float(food_item_info[73])
,t2VitaminKPhylloquinone_mcg= float(food_item_info[74])
,t2Carotene_Beta_mcg= float(food_item_info[75])
,t2Carotene_Alpha_mcg= float(food_item_info[76])
,t2Cryptoxanthin_Beta_mcg= float(food_item_info[77])
,t2Lycopene_mcg= float(food_item_info[78])
,t2Lutein_Zeaxanthin_mcg= float(food_item_info[79])
,t2VitaminD_IU= float(food_item_info[80])
,t3Stigmasterol_mg= float(food_item_info[81])
,t3Phytosterols_mg= float(food_item_info[82])
,t3Beta_sitosterol_mg= float(food_item_info[83])
,t3Campesterol_mg= float(food_item_info[84])
,t3Cholesterol_mg= float(food_item_info[85])
,t3FattyAcids_TotalMonounsaturated_g= float(food_item_info[86])
,t3FattyAcids_TotalPolyunsaturated_g= float(food_item_info[87])
,t3FattyAcids_TotalSaturated_g= float(food_item_info[88])
,t3FattyAcids_TotalTrans_monoenoic_g= float(food_item_info[89])
,t3FattyAcids_TotalTrans_polyenoic_g= float(food_item_info[90])
,t3FattyAcids_TotalTrans_g= float(food_item_info[91])
,t3MonounsaturatedFats14_1_g= float(food_item_info[92])
,t3MonounsaturatedFats15_1_g= float(food_item_info[93])
,t3MonounsaturatedFats16_1C_g= float(food_item_info[94])
,t3MonounsaturatedFats16_1T_g= float(food_item_info[95])
,t3MonounsaturatedFats16_1Undifferentiated_g= float(food_item_info[96])
,t3MonounsaturatedFats17_1_g= float(food_item_info[97])
,t3MonounsaturatedFats18_1C_g= float(food_item_info[98])
,t3MonounsaturatedFats18_1T_g= float(food_item_info[99])
,t3MonounsaturatedFats18_1Undifferentiated_g= float(food_item_info[100])
,t3MonounsaturatedFats20_1_g= float(food_item_info[101])
,t3MonounsaturatedFats22_1C_g= float(food_item_info[102])
,t3MonounsaturatedFats22_1T_g= float(food_item_info[103])
,t3MonounsaturatedFats22_1Undifferentiated_g= float(food_item_info[104])
,t3MonounsaturatedFats24_1C_g= float(food_item_info[105])
,t3PolyunsaturatedFats18_2CLAs_g= float(food_item_info[106])
,t3PolyunsaturatedFats18_2I_g= float(food_item_info[107])
,t3PolyunsaturatedFats18_2N_6C_c_g= float(food_item_info[108])
,t3PolyunsaturatedFats18_2T_t_g= float(food_item_info[109])
,t3PolyunsaturatedFats18_2TNotFurtherDefined_g= float(food_item_info[110])
,t3PolyunsaturatedFats18_2Undifferentiated_g= float(food_item_info[111])
,t3PolyunsaturatedFats18_3N_3C_c_c_g= float(food_item_info[112])
,t3PolyunsaturatedFats18_3N_6C_c_c_g= float(food_item_info[113])
,t3PolyunsaturatedFats18_3Undifferentiated_g= float(food_item_info[114])
,t3PolyunsaturatedFats18_3i_g= float(food_item_info[115])
,t3PolyunsaturatedFats18_4_g= float(food_item_info[116])
,t3PolyunsaturatedFats20_2N_6C_c_g= float(food_item_info[117])
,t3PolyunsaturatedFats20_3N_3_g= float(food_item_info[118])
,t3PolyunsaturatedFats20_3N_6_g= float(food_item_info[119])
,t3PolyunsaturatedFats20_3Undifferentiated_g= float(food_item_info[120])
,t3PolyunsaturatedFats20_4N_6_g= float(food_item_info[121])
,t3PolyunsaturatedFats20_4Undifferentiated_g= float(food_item_info[122])
,t3PolyunsaturatedFats20_5N_3_g= float(food_item_info[123])
,t3PolyunsaturatedFats21_5_g= float(food_item_info[124])
,t3PolyunsaturatedFats22_4_g= float(food_item_info[125])
,t3PolyunsaturatedFats22_5N_3_g= float(food_item_info[126])
,t3PolyunsaturatedFats22_6N_3_g= float(food_item_info[127])
,t3SaturatedFats10_0_g= float(food_item_info[128])
,t3SaturatedFats12_0_g= float(food_item_info[129])
,t3SaturatedFats13_0_g= float(food_item_info[130])
,t3SaturatedFats14_0_g= float(food_item_info[131])
,t3SaturatedFats15_0_g= float(food_item_info[132])
,t3SaturatedFats16_0_g= float(food_item_info[133])
,t3SaturatedFats17_0_g= float(food_item_info[134])
,t3SaturatedFats18_0_g= float(food_item_info[135])
,t3SaturatedFats20_0_g= float(food_item_info[136])
,t3SaturatedFats22_0_g= float(food_item_info[137])
,t3SaturatedFats24_0_g= float(food_item_info[138])
,t3SaturatedFats4_0_g= float(food_item_info[139])
,t3SaturatedFats6_0_g= float(food_item_info[140])
,t3SaturatedFats8_0_g= float(food_item_info[141])
,t4Alanine_g= float(food_item_info[142])
,t4Arginine_g= float(food_item_info[143])
,t4AsparticAcid_g= float(food_item_info[144])
,t4Cystine_g= float(food_item_info[145])
,t4GlutamicAcid_g= float(food_item_info[146])
,t4Glycine_g= float(food_item_info[147])
,t4Histidine_g= float(food_item_info[148])
,t4Hydroxyproline_g= float(food_item_info[149])
,t4Isoleucine_g= float(food_item_info[150])
,t4Leucine_g= float(food_item_info[151])
,t4Lysine_g= float(food_item_info[152])
,t4Methionine_g= float(food_item_info[153])
,t4Phenylalanine_g= float(food_item_info[154])
,t4Proline_g= float(food_item_info[155])
,t4Serine_g= float(food_item_info[156])
,t4Threonine_g= float(food_item_info[157])
,t4Tryptophan_g= float(food_item_info[158])
,t4Tyrosine_g= float(food_item_info[159])
,t4Valine_g= float(food_item_info[160])
,t5Ash_g= float(food_item_info[161])
,t5Alcohol_Ethyl_g= float(food_item_info[162])
,t5Caffeine_mg= float(food_item_info[163])
,t5Theobromine_mg= float(food_item_info[164]))
return food_item
def createDict():
#Get the ext_nutrients by the right format (unsorted) - b
#Get the ext_nutrients by the format - ext_cat (nestedlist)
a = open('ex_nutrient_cat.txt','r')
ext_cat = [[] for i in range(6)]
b = []
dict = {}
for i in a:
i = i.rstrip('\n')
index = int(i[0])
i = i.split()
if len(i) > 1:
for eachi in i:
eachi[0].upper()
new = ""
for eachi in i:
new = new+eachi
i = new.split('/')
i = i[0]+"_"+i[1]
i = i[0].lower() + i[1::]
ext_cat[index].append(i)
b.append(i)
a.close()
# Sort excat for the fats
ext_cat[3].sort()
ext_cat[3].remove("3Phytosterols_mg")
ext_cat[3].insert(0,"3Phytosterols_mg")
ext_cat[3].remove("3Stigmasterol_mg")
ext_cat[3].insert(0,"3Stigmasterol_mg")
correctOrder = []
ext_cat[4].sort()
# Unnest the excat into correctOrder
for each in ext_cat:
for eachi in each:
correctOrder.append(eachi)
#Creating dictionary mapping correctOrder and the unsorted b
for wrong_index in range(len(b)):
for right_index in range(len(correctOrder)):
if b[wrong_index] == correctOrder[right_index]:
dict[wrong_index] = right_index
#Get the list of nutrients in format and in order
testOrder = [[] for i in range(len(b))]
for try_index in range(len(b)):
right_index = dict[try_index]
testOrder[right_index] = b[try_index]
for each in testOrder:
print each
return dict
def addAllFood(session,dict):
j_result = -23
dict = createDict()
while (j_result <= 826) :
print j_result
result = open('result'+str(j_result),'r')
for eachInfo_list in result:
eachInfo_list = eachInfo_list.rstrip('\n')
eachInfo_list = eachInfo_list.split('^')
#Basic Nutrients
eachBasicInfo = eachInfo_list[0]
eachBasicInfo = eachBasicInfo.split('|')
eachBasicInfo.remove('')
for i in range(len(eachBasicInfo)):
if eachBasicInfo[i] == "NA" and i == 3:
eachBasicInfo[i] = " "
elif eachBasicInfo[i] == "NA":
eachBasicInfo[i] = 0
#Extra Nutrients
extBasicInfo = eachInfo_list[1]
extBasicInfo = extBasicInfo.split('|')
extBasicInfo.remove('')
new = [[] for i in range(len(extBasicInfo))]
for i in range(len(extBasicInfo)):
right_index = dict[i]
new[right_index] = extBasicInfo[i]
#Combine extInfo with basic info
eachBasicInfo += new
#Manage NA
for i in range(len(eachBasicInfo)):
if eachBasicInfo[i] == "NA" and i == 3:
eachBasicInfo[i] = " "
elif eachBasicInfo[i] == 0 and i == 5 and eachBasicInfo[i+1] == "Serving":
eachBasicInfo[i] = 1
elif eachBasicInfo[i] == "NA" or eachBasicInfo[i] == '~':
eachBasicInfo[i] = 0
# extnutrient = ["t0Water_g","t0Energy_kcal","t0Energy_kj","t0Protein_g","t0TotalLipidFat_g","t0Carbohydrate_ByDifference_g","t0Fiber_TotalDietary_g","t0Sugars_Total_g","t0Sucrose_g","t0GlucoseDextrose_g","t0Fructose_g","t0Lactose_g","t0Maltose_g","t0Galactose_g","t0Starch_g","t0AdjustedProtein_g","t1Calcium_Ca_mg","t1Iron_Fe_mg","t1Magnesium_Mg_mg","t1Phosphorus_P_mg","t1Potassium_K_mg","t1Sodium_Na_mg","t1Zinc_Zn_mg","t1Copper_Cu_mg","t1Manganese_Mn_mg","t1Selenium_Se_mcg","t1Fluoride_F_mcg","t2VitaminC_TotalAscorbicAcid_mg","t2Thiamin_mg","t2Riboflavin_mg","t2Niacin_mg","t2PantothenicAcid_mg","t2VitaminB_6_mg","t2Folate_Total_mcg","t2FolicAcid_mcg","t2Folate_Food_mcg","t2Folate_DFE_mcg_DFE","t2Choline_Total_mg","t2Betaine_mg","t2VitaminB_12_mcg","t2VitaminB_12_Added_mcg","t2VitaminA_IU_IU","t2VitaminA_RAE_mcg_RAE","t2Retinol_mcg","t2VitaminE_alpha_tocopherol__mg","t2VitaminE_Added_mg","t2Tocopherol_Beta_mg","t2Tocopherol_Gamma_mg","t2Tocopherol_Delta_mg","t2VitaminKPhylloquinone_mcg","t2Carotene_Beta_mcg","t2Carotene_Alpha_mcg","t2Cryptoxanthin_Beta_mcg","t2Lycopene_mcg","t2Lutein_Zeaxanthin_mcg","t2VitaminD_IU","t3Stigmasterol_mg","t3Phytosterols_mg","t3Beta_sitosterol_mg","t3Campesterol_mg","t3Cholesterol_mg","t3FattyAcids_TotalMonounsaturated_g","t3FattyAcids_TotalPolyunsaturated_g","t3FattyAcids_TotalSaturated_g","t3FattyAcids_TotalTrans_monoenoic_g","t3FattyAcids_TotalTrans_polyenoic_g","t3FattyAcids_TotalTrans_g","t3MonounsaturatedFats14_1_g","t3MonounsaturatedFats15_1_g","t3MonounsaturatedFats16_1C_g","t3MonounsaturatedFats16_1T_g","t3MonounsaturatedFats16_1Undifferentiated_g","t3MonounsaturatedFats17_1_g","t3MonounsaturatedFats18_1C_g","t3MonounsaturatedFats18_1T_g","t3MonounsaturatedFats18_1Undifferentiated_g","t3MonounsaturatedFats20_1_g","t3MonounsaturatedFats22_1C_g","t3MonounsaturatedFats22_1T_g","t3MonounsaturatedFats22_1Undifferentiated_g","t3MonounsaturatedFats24_1C_g","t3PolyunsaturatedFats18_2CLAs_g","t3PolyunsaturatedFats18_2I_g","t3PolyunsaturatedFats18_2N_6C_c_g","t3PolyunsaturatedFats18_2T_t_g","t3PolyunsaturatedFats18_2TNotFurtherDefined_g","t3PolyunsaturatedFats18_2Undifferentiated_g","t3PolyunsaturatedFats18_3N_3C_c_c_g","t3PolyunsaturatedFats18_3N_6C_c_c_g","t3PolyunsaturatedFats18_3Undifferentiated_g","t3PolyunsaturatedFats18_3i_g","t3PolyunsaturatedFats18_4_g","t3PolyunsaturatedFats20_2N_6C_c_g","t3PolyunsaturatedFats20_3N_3_g","t3PolyunsaturatedFats20_3N_6_g","t3PolyunsaturatedFats20_3Undifferentiated_g","t3PolyunsaturatedFats20_4N_6_g","t3PolyunsaturatedFats20_4Undifferentiated_g","t3PolyunsaturatedFats20_5N_3_g","t3PolyunsaturatedFats21_5_g","t3PolyunsaturatedFats22_4_g","t3PolyunsaturatedFats22_5N_3_g","t3PolyunsaturatedFats22_6N_3_g","t3SaturatedFats10_0_g","t3SaturatedFats12_0_g","t3SaturatedFats13_0_g","t3SaturatedFats14_0_g","t3SaturatedFats15_0_g","t3SaturatedFats16_0_g","t3SaturatedFats17_0_g","t3SaturatedFats18_0_g","t3SaturatedFats20_0_g","t3SaturatedFats22_0_g","t3SaturatedFats24_0_g","t3SaturatedFats4_0_g","t3SaturatedFats6_0_g","t3SaturatedFats8_0_g","t4Alanine_g","t4Arginine_g","t4AsparticAcid_g","t4Cystine_g","t4GlutamicAcid_g","t4Glycine_g","t4Histidine_g","t4Hydroxyproline_g","t4Isoleucine_g","t4Leucine_g","t4Lysine_g","t4Methionine_g","t4Phenylalanine_g","t4Proline_g","t4Serine_g","t4Threonine_g","t4Tryptophan_g","t4Tyrosine_g","t4Valine_g","t5Ash_g","t5Alcohol_Ethyl_g","t5Caffeine_mg","t5Theobromine_mg"]
# print "########"
# print len(eachBasicInfo)
# print len(extnutrient)
# for k in range(len(eachBasicInfo)):
# if k >= 25:
# print extnutrient[k-25],
# print eachBasicInfo[k]
eachBasicInfo[26] = eachBasicInfo[8] #cal_kcal
eachBasicInfo[29] = eachBasicInfo[10] # total fat
eachBasicInfo[88] = eachBasicInfo[12] #saturated fat
eachBasicInfo[87] = eachBasicInfo[13] #polyun
eachBasicInfo[86] = eachBasicInfo[14] #mono-un
eachBasicInfo[85] = eachBasicInfo[15] #choles
eachBasicInfo[46] = eachBasicInfo[16] #sodium
eachBasicInfo[30] = eachBasicInfo[17] #carb
eachBasicInfo[31] = eachBasicInfo[18] #fiber
eachBasicInfo[32] = eachBasicInfo[19] #sugar
eachBasicInfo[28] = eachBasicInfo[20] #protein
if eachBasicInfo[21] != 0:
eachBasicInfo[66] = float(eachBasicInfo[21])*5000/100 #vita
if eachBasicInfo[22] != 0:
eachBasicInfo[52] = float(eachBasicInfo[22])*60/100 # vitc
if eachBasicInfo[23] != 0:
eachBasicInfo[41] = float(eachBasicInfo[23])*1000/100 #calcium
if eachBasicInfo[24] != 0:
eachBasicInfo[42] = float(eachBasicInfo[24])*18/100 # iron
newFood = createFood(eachBasicInfo)
session.add(newFood)
session.commit()
####
# tag = newFood.tag
# tagList = tag.split()
# for eachTag in tagList:
# eachKey = FoodKey(keyid = newFood.id, word = eachTag)
# session.add(eachKey)
# session.commit()
print "Done committing at", j_result
result.close()
j_result += 1
dict = createDict()
addAllFood(db.session,dict)
db.session.commit()