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Submission of v3.5.0

  • provide optional (optimalWarmStart = FALSE) more parallelization when profiling likelihood
  • make maxResets a function parameter
  • ensure compatibility with R v4.4

Test environments

  • local OS X install, R 4.2 / 4.4
  • r-devel-valgrind docker container
  • ubuntu 20.04 (via gh-actions: devel and release)
  • win-builder (devel and release)

R CMD check results

  • There were no ERRORs or WARNINGs
  • There is 1 occasional NOTE: checking installed package size ... NOTE installed size is 22.5Mb sub-directories of 1Mb or more: libs 21.7Mb

This occurs on systems (like 'r-devel-linux-x86_64-fedora-clang') that include debug symbols in their compilation; Cyclops performance is heavily dependent on many template instantiations that generate a large library when including debug symbols. Future availability of C++17 'if (constexpr ...)' should decrease library size substantially.

Downstream dependencies

  • 'EvidenceSynthesis' - checked and works.
  • 'EmpiricalCalibration' - checked and works.
  • 'IterativeHardThresholding' - checked and works.
  • 'BrokenAdaptiveRidge' - checked and works.