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Merge pypsa eur sec #484

Merged
merged 1,211 commits into from
Mar 18, 2023
Merged

Merge pypsa eur sec #484

merged 1,211 commits into from
Mar 18, 2023
+86,206 −3,666
This pull request is big! We’re only showing the most recent 250 commits.

Commits on Feb 6, 2023

  1. manage process emissions in spatial

    @fneum
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  2. fix process emission localisation with co2 (not) spatially resolved

    @fneum
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Commits on Feb 7, 2023

  1. update gitignore

    @FabianHofmann
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Commits on Feb 8, 2023

  1. solve.py: start converting extra_funcionalities

    @FabianHofmann
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  2. solve_network.py: switch to linopy interface

    @FabianHofmann
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  3. config: move solver options in dedicated section 

    test configs: reduce to relative changes
CI: use snakemake --configfile options
    @FabianHofmann
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  4. ci: fix test configs

    @FabianHofmann
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  5. CI: fix empty dict in configs

    @FabianHofmann
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  6. ci: format configs

    @FabianHofmann
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  7. ci: format configs II

    @FabianHofmann
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  8. config: modularize solver_options

    @FabianHofmann
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  9. Merge branch 'ci-review' into linopy-integration

    Fabian Hofmann authored Feb 8, 2023
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  10. Merge pull request #293 from PyPSA/linopy-integration 

    Integrate linopy as solver framework
    Fabian Hofmann authored Feb 8, 2023
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  11. solve_network: activate co2 seq constraint 

    Snakefile: retrieve data bundle from pypsaeur function
    @FabianHofmann
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  12. Merge pull request #297 from PyPSA/no-sw-technology-data 

    automatically retrieve technology-data, no git clone
    Fabian Hofmann authored Feb 8, 2023
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  13. Merge branch 'master' into ci-review

    Fabian Hofmann authored Feb 8, 2023
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  14. prepare sector: add allam cycle 

    build sequestration: fix input for new snakemake versions
    @FabianHofmann
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  15. update technology data version

    @FabianHofmann
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  16. solve_network: fix kwargs in solve_network

    @FabianHofmann
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  17. prepare sector: harmonize logger infos

    @FabianHofmann
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  18. add_brownfield: remove basename import

    @FabianHofmann
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  19. plot_network: fix empty h2 retrofit for myopic

    @FabianHofmann
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Commits on Feb 9, 2023

  1. update gitignore

    @FabianHofmann
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  2. prepare sector: fix logger percentage info

    @FabianHofmann
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Commits on Feb 10, 2023

  1. compatibility with technology-data v0.5

    @fneum
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  2. Merge pull request #300 from PyPSA/tech-data-0.5 

    compatibility with technology-data v0.5
    @lisazeyen
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  3. solve network: fix sequestration constraint

    @FabianHofmann
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  4. Merge branch 'master' into ci-review

    Fabian Hofmann authored Feb 10, 2023
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Commits on Feb 11, 2023

  1. pandas update: closed to inclusive

    @fneum
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  2. Merge branch 'master' of github.com:pypsa/pypsa-eur-sec

    @fneum
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Commits on Feb 15, 2023

  1. add min part load for FT and methanolisation via p_min_pu

    @fneum
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  2. add option to use electrolysis waste heat in district heating

    @fneum
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  3. add release note

    @fneum
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  4. Merge pull request #302 from PyPSA/minpartload 

    add min part load for FT and methanolisation via p_min_pu
    @fneum
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  5. Merge pull request #303 from PyPSA/electrolysis-wasteheat 

    add option to use electrolysis waste heat in district heating
    @fneum
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  6. Merge branch 'master' into carbon-management

    @fneum
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Commits on Feb 16, 2023

  1. merging script in retrieve_gas_input_location with build_gas_input_lo… 

    …cation
    @virio-andreyana
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  2. make sequestration options configurable

    @fneum
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  3. add release note

    @fneum
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  4. add new options to test config files

    @fneum
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  5. Merge pull request #296 from PyPSA/carbon-management 

    carbon management
    @fneum
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  6. Merge branch 'master' into update-lng-ports

    @fneum
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  7. gas_input: use HTTP remote, rename conversion factors, fix undesired … 

    …rule removal
    @fneum
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  8. Merge pull request #289 from PyPSA/update-lng-ports 

    Replacing the IGGIELNG_LNG data with Europe-Gas-Tracker
    @fneum
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  9. resolve merge conflicts

    @fneum
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  10. cherry-pick from #282 

    Co-authored-by: Fabian Hofmann <[email protected]>
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  11. Merge pull request #304 from PyPSA/ci-review-cherries 

    cherry-pick from #282
    @fneum
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  12. Merge branch 'master' into ci-review

    @fneum
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  13. minor fixes and address deprecation warnings

    @fneum
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  14. organise release notes

    @fneum
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  15. add workflow rulegraph

    @fneum
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  16. Merge pull request #305 from PyPSA/release-v0.7.0 

    minor fixes and address deprecation warnings
    @fneum
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  17. remove gitter

    @fneum
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  18. Merge branch 'master' of github.com:pypsa/pypsa-eur-sec

    @fneum
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Commits on Feb 18, 2023

  1. Hide uninformative text caused by subprocess outputs

    @virio-andreyana
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Commits on Feb 21, 2023

  1. Merge pull request #306 from PyPSA/hide-subprocess-output 

    Hide uninformative text caused by subprocess outputs
    Fabian Hofmann authored Feb 21, 2023
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  2. Merge branch 'master' into ci-review

    @FabianHofmann
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  3. solve_network: warn if network is not optimal

    @FabianHofmann
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  4. use muting of excel read with context manager

    @FabianHofmann
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Commits on Feb 22, 2023

  1. Merge pull request #307 from PyPSA/read-excel-mute-follow-up 

    mute excel reading with context manager
    Fabian Hofmann authored Feb 22, 2023
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  2. Merge pull request #282 from PyPSA/ci-review 

    Transition to `linopy` implementation
    Fabian Hofmann authored Feb 22, 2023
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  3. fixing some warnings in build_biomass_potentials.py, build_gas_input_… 

    …locations.py, scripts/build_population_layouts.py
    @virio-andreyana
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  4. Update build_biomass_potentials.py 

    Maybe something in the middle? swiss is a list, while pop was a panda series.
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  5. Merge pull request #309 from PyPSA/fix-minor-warnings 

    Fixing some warnings in biomass_potentials, gas_input_locations and population_layouts
    Fabian Hofmann authored Feb 22, 2023
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  6. build_population_layouts: replace vresutils area calculation

    @FabianHofmann
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  7. add shipping shares for different years

    @lisazeyen
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  8. Merge pull request #310 from PyPSA/area-calculation-wo-vresutils 

    build_population_layouts: replace vresutils area calculation
    Fabian Hofmann authored Feb 22, 2023
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  9. Merge pull request #311 from PyPSA/shipping-fuel-years 

    add shipping shares for different years
    @fneum
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  10. adjust p_nom_max if existing larger

    @lisazeyen
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  11. Merge pull request #312 from PyPSA/myopic-p_nom_max 

    myopic: adjust p_nom_max if existing larger
    @fneum
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  12. ci: reduce duplications of test/config.*.yaml

    @fneum
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  13. Merge pull request #313 from PyPSA/ci-config 

    ci: reduce duplications of test/config.*.yaml
    Fabian Hofmann authored Feb 22, 2023
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Commits on Feb 23, 2023

  1. Replacing print statement with logging

    @virio-andreyana
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Commits on Feb 24, 2023

  1. Sentence capitalized

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Commits on Mar 1, 2023

  1. lower log level in plot_summary.py and fix warning 

    reduce the level of "Dropping technology energy balance smaller than {snakemake.config['plotting']['energy_threshold']/10} {units}" and "Total energy balance for {v} of {round(df.sum()[0],2)} {units}" from INFO-> DEBUG. 

Extra warning fix
Add `plt.cla()` in the `for k, v in balances.items()` and take out fig, ax = plt.subplots(figsize=(12,8)) from that for loop to fix RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`).
    @virio-andreyana
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  2. fix SettingwithCopyWarning in plot_network.py 

    Fix SettingwithCopyWarning in plot_network.py by using pandas clip and replace.
    @virio-andreyana
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Commits on Mar 2, 2023

  1. add highs solver options

    @lisazeyen
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  2. Merge pull request #318 from PyPSA/highs-settings 

    add highs solver options
    @lisazeyen
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Commits on Mar 3, 2023

  1. add link to highs solver settings

    @lisazeyen
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Commits on Mar 5, 2023

  1. Merge pull request #314 from PyPSA/loggin-replace-print 

    Replacing print statement with logging
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Commits on Mar 6, 2023

  1. apply pre-commit

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  2. exclude snakefmt, special spellings from pre-commit

    @fneum
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  3. pre-commit setup: fix spelling exceptions

    @fneum
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  4. spelling corrections

    @fneum
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  5. format pre-commit config

    @fneum
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  6. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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  7. fix isort compatibility

    @fneum
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  8. resolve merge conflict

    @fneum
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  9. add .git-blame-ignore-revs

    @fneum
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  10. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  11. fix: handle overlooked merge conflict

    @fneum
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  12. resolve merge conflict

    @fneum
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  13. Merge pull request #320 from PyPSA/pre-commit 

    Pre commit
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  14. Merge remote-tracking branch 'pypsa-eur-sec/master' into merge-pypsa-… 

    …eur-sec
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  15. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  16. split solve network rules, take summary scripts from Sec

    @fneum
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  17. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  18. merge docs

    @fneum
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  19. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  20. trigger readthedocs webhook

    @fneum
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  21. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  22. trigger readthedocs webhook II

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  23. conform to pypsa-eur logging level definition

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  24. how to handle upcoming releases

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  25. doc: reorganise pre-merge PyPSA-Eur release notes

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  26. remove superfluous license file

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  27. use line length factor from single config source

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  28. remove unneeded currency conversion USD to EUR

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  29. align cost fill values to pypsa-eur implementation

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  30. add input file handling of pypsa-eur-sec rules using cutout

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  31. remove duplicate retrieve_cost_data

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  32. COSTS are data not resources

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  33. fix path references in Snakefile

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  34. Merge branch 'master' into merge-pypsa-eur-sec

    @FabianHofmann
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  35. correct aggregation strategies

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  36. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  37. add missing cutout input

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  38. scripts/ remove summary_dir and results_dir references

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  39. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  40. correct benchmark

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  41. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

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  42. fix all lv references to ll, pickup right location of default lifetime

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  43. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  44. prepare CI for all three cases

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  45. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

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  46. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  47. fix solve_all_elec_networks

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  48. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

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  49. remove plot_p_nom_max

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  50. re-allow 'all' clusters wilcard value

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  51. technology-data not dependent on run

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  52. fix logs and benchmark directories

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  53. remove figsize from config

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  54. fix cutout retrieval in ci

    @FabianHofmann
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  55. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  56. delete unnecessary log files 

    fix make_summary for myopic
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  57. disable windows/macos to reduce CI load

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  58. add spdx identifiers to scripts

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  59. use mock_snakemake from pypsa-eur

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  60. remove accidental log additions

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  61. use progress_retrieve from single source

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  62. remove unused function in _helpers

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  63. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  64. merge helper.py into _helpers.py

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  65. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  66. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  67. reuse compatibility for pypsa-eur-sec code

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  68. snakefmt to Snakefile

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  69. doc: update landing page

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Commits on Mar 7, 2023

  1. move snakemake object out of imap process functions

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  2. ci: reactivate windows and mac

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  3. build industrial production: fix partial function in imap

    @FabianHofmann
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  4. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  5. snakefile: fix benchmark path

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  6. build industrial demand/production: ensure compat with multiprocesses… 

    … on win/mac
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  7. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  8. ci overnight/myopic: use glpk

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  9. scripts: apply linting fixes

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  10. snakefile: introduce RESOURCES, RESULTS, BENCHMARKS, LOGS paths

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  11. Snakefile: replace else statements by if statement to satisfy snakefmt

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  12. reenable snakefmt

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  13. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  14. allow to disable progressbar

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Commits on Mar 8, 2023

  1. modularise Snakefile using rules/*.smk files

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  2. add conda directive to all rules for use with --use-conda

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  3. correct paths to scripts in .smk files

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  4. apply snakefmt to rules/

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  5. make cutouts protected 

    https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html\#protected-and-temporary-files
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  6. data/bundle files may be ancient

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  7. retrieval rules get retries directive for added robustness

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  8. add a purge rule

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  9. add rule for dag, use shutil to purge outputs

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  10. add message for dag rule

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  11. Snakefile: correct indent

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  12. add graphviz to environment

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  13. add logfiles to all rules

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  14. snakefmt to Snakefile

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  15. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  16. new minimum snakemake version is 7.7

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  17. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  18. upload resources and results as artifacts

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Commits on Mar 9, 2023

  1. eliminate manual country code conversion, adjust mock_snakemake to ll… 

    … wildcard
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. ci: update actions/checkout

    @FabianHofmann
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  4. ci: reset data cache number

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  5. sector-coupled: run on subset of selected countries

    @fneum
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  6. sort countries

    @fneum
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  7. Merge branch 'merge-pypsa-eur-sec' into sec-subset-countries

    @fneum
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  8. speed-up CI, just a week rather than a month, 4 nodes, 40H

    @fneum
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  9. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  10. keep CI running if one OS fails

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  11. Merge branch 'sec-subset-countries' of github.com:PyPSA/pypsa-eur int… 

    …o sec-subset-countries
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  12. Merge pull request #623 from PyPSA/sec-subset-countries 

    Run also sector-coupled build part for subset of countries
    @fneum
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  13. ci: add --rerun-triggers=mtime to improve caching

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  14. Merge branch 'sec-subset-countries' into merge-pypsa-eur-sec

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  15. ci: revert to 5 regions

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  16. add minimal description of all scripts

    @fneum
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  17. helpers: allow to overwrite config in mock_snakemake and allow mock_s… 

    …nakemake to be called from repo root
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  18. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  19. docs: rearrange sections

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  20. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  21. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  22. add Linopy to PyPSA

    @pz-max
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  23. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  24. harmonive solve_network across workflow

    @FabianHofmann
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Commits on Mar 10, 2023

  1. fix Nyears scaling

    @FabianHofmann
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  2. prepare_sector: revert taking mean 

    config.overnight: revert hourly resolution
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  3. adress review comments

    @FabianHofmann
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  4. Update scripts/solve_network.py 

    Co-authored-by: Fabian Neumann <[email protected]>
    @FabianHofmann @fneum
    FabianHofmann and fneum authored Mar 10, 2023
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  5. solve_network: reinsert docstring

    @FabianHofmann
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  6. solve_network: add line breaks in docstring

    @FabianHofmann
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  7. follow up: fix img path

    @FabianHofmann
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  8. Merge pull request #625 from PyPSA/linopy-eur 

    add Linopy to PyPSA-Eur
    @FabianHofmann
    FabianHofmann authored Mar 10, 2023
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  9. build_sequestration: fix url with docformatter

    @FabianHofmann
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  10. solve_network: check if sector_opts is in wildcard

    @FabianHofmann
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  11. follow up

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Commits on Mar 13, 2023

  1. [pre-commit.ci] pre-commit autoupdate 

    updates:
- [github.com/codespell-project/codespell: v2.2.2 → v2.2.4](codespell-project/codespell@v2.2.2...v2.2.4)
- [github.com/snakemake/snakefmt: v0.8.1 → v0.8.2](snakemake/snakefmt@v0.8.1...v0.8.2)
    @pre-commit-ci
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Commits on Mar 14, 2023

  1. Merge pull request #627 from PyPSA/pre-commit-ci-update-config 

    [pre-commit.ci] pre-commit autoupdate
    @fneum
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  2. codespell: fix typo & add word to exception list

    @FabianHofmann
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Commits on Mar 15, 2023

  1. enhance documentation, with instructions for sector-coupled / electri… 

    …city-only studies
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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Commits on Mar 16, 2023

  1. remove manual country codes

    @fneum
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  2. docs: add release notes and document new config options

    @fneum
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  3. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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  4. docs: add missing configuration options

    @fneum
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  5. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  6. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  7. docs: cartopy cannot be installed from pip alone

    @fneum
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  8. docs: complete instructions for sector-coupling tutorial2

    @fneum
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  9. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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  10. config.default.yaml 

    set default share_cutout: True
    @lisazeyen
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  11. add more sector_opts wildcards

    @lisazeyen
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  12. docs: limit matplotlib<3.6

    @fneum
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  13. docs: limit matplotlib>3.5.1,<3.6

    @fneum
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  14. correct snakemake call for sector coupled networks

    @lisazeyen
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  15. encapsulate imports in helpers to minimise requirements for docs

    @fneum
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  16. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  17. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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  18. doc: fix number of columns for sector-oprt

    @fneum
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  19. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  20. doc: add ways to cite PyPSA-Eur

    @fneum
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  21. doc: add list of publications

    @fneum
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  22. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
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  23. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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Commits on Mar 17, 2023

  1. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci @fneum
    pre-commit-ci[bot] authored and fneum committed Mar 17, 2023
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  2. Merge branch 'merge-pypsa-eur-sec' of github.com:PyPSA/pypsa-eur into… 

    … merge-pypsa-eur-sec
    @fneum
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  3. fix license specification of doc/publications.bib

    @fneum
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  4. doc: implement review feedback

    @fneum
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  5. doc: implement review feedback (amend)

    @fneum
    fneum committed Mar 17, 2023
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  6. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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