diff --git a/.bandit.yml b/.bandit.yml deleted file mode 100644 index 91e894a23..000000000 --- a/.bandit.yml +++ /dev/null @@ -1,2 +0,0 @@ -assert_used: - skips: ['*/test_*.py', '*/test_*.py'] diff --git a/.editorconfig b/.editorconfig index fd5ec981a..c976a7f03 100644 --- a/.editorconfig +++ b/.editorconfig @@ -10,9 +10,3 @@ insert_final_newline = true [{*.yaml,*.yml}] indent_size = 2 - -[*.{kt,kts}] -ktlint_standard_filename = disabled -kltint_experimental_property-naming = disabled -ij_kotlin_allow_trailing_comma = true -ij_kotlin_allow_trailing_comma_on_call_site = true diff --git a/.github/dependabot.yml b/.github/dependabot.yml index 50429404c..7011f872e 100644 --- a/.github/dependabot.yml +++ b/.github/dependabot.yml @@ -14,15 +14,7 @@ updates: directory: '/' schedule: interval: 'monthly' - - # docs - - package-ecosystem: 'pip' - directory: '/docs' - schedule: - interval: 'monthly' - - # src - package-ecosystem: 'pip' - directory: '/src' + directory: '/' schedule: interval: 'monthly' diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 8f048f54e..43ec0e841 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -11,6 +11,6 @@ jobs: python-version: [ "3.10" ] uses: lars-reimann/.github/.github/workflows/poetry-codecov-reusable.yml@main with: - working-directory: src + working-directory: . python-version: ${{ matrix.python-version }} module-name: safeds diff --git a/.github/workflows/merge_queue.yml b/.github/workflows/merge_queue.yml index 31a71fe0d..30515e8e3 100644 --- a/.github/workflows/merge_queue.yml +++ b/.github/workflows/merge_queue.yml @@ -10,7 +10,7 @@ jobs: python-version: [ "3.10" ] uses: lars-reimann/.github/.github/workflows/poetry-codecov-reusable.yml@main with: - working-directory: src + working-directory: . python-version: ${{ matrix.python-version }} module-name: safeds coverage: false diff --git a/.github/workflows/pr.yml b/.github/workflows/pr.yml index dcec80796..fc37ba245 100644 --- 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"usability", "learnability"] packages = [ - { include = "safeds" }, + { include = "safeds", from = "src"}, ] [tool.poetry.dependencies] @@ -20,10 +20,27 @@ seaborn = "^0.12.2" ipython = "^8.8.0" matplotlib = "^3.6.3" -[tool.poetry.dev-dependencies] +[tool.poetry.group.dev.dependencies] pytest = "^7.2.1" pytest-cov = "^4.0.0" +[tool.poetry.group.docs.dependencies] +jupyter = "^1.0.0" +mkdocs = "^1.4.2" +mkdocstrings = "^0.20.0" +mkdocstrings-python = "^0.8.3" +mkdocs-autorefs = "^0.4.1" +mkdocs-gen-files = "^0.4.0" +mkdocs-glightbox = "^0.3.1" +mkdocs-literate-nav = "^0.6.0" +mkdocs-material = "^9.1.2" +mkdocs-section-index = "^0.3.5" + [build-system] requires = ["poetry-core>=1.0.0"] build-backend = "poetry.core.masonry.api" + +[tool.mypy] +disallow_incomplete_defs = true +disallow_untyped_defs = true +ignore_missing_imports = true diff --git a/readthedocs.yml b/readthedocs.yml index 31a8eded2..a44150b2a 100644 --- a/readthedocs.yml +++ b/readthedocs.yml @@ -4,12 +4,13 @@ build: os: ubuntu-22.04 tools: python: '3.10' + jobs: + # https://docs.readthedocs.io/en/stable/build-customization.html#install-dependencies-with-poetry + post_create_environment: + - pip install poetry + - poetry config virtualenvs.create false + post_install: + - poetry install --with docs mkdocs: configuration: mkdocs.yml - -python: - install: - - requirements: docs/requirements.txt - - method: pip - path: src diff --git a/release.config.js b/release.config.js index 78086f54e..867de26b8 100644 --- a/release.config.js +++ b/release.config.js @@ -14,22 +14,21 @@ module.exports = { verifyConditionsCmd: `if [ 403 != $(curl -X POST -F ':action=file_upload' -u __token__:$PYPI_TOKEN -s -o /dev/null -w '%{http_code}' ${PYPI_REPOSITORY}) ]; then (exit 0); else (echo 'Authentication error. Please check the PYPI_TOKEN environment variable.' && exit 1); fi`, prepareCmd: 'poetry version ${nextRelease.version}', publishCmd: 'poetry publish --build --username __token__ --password $PYPI_TOKEN --no-interaction -vvv', - execCwd: 'src', }, ], [ '@semantic-release/github', { assets: [ - { path: 'src/dist/*.tar.gz', label: 'sdist' }, - { path: 'src/dist/*.whl', label: 'wheel' }, + { path: 'dist/*.tar.gz', label: 'sdist' }, + { path: 'dist/*.whl', label: 'wheel' }, ], }, ], [ '@semantic-release/git', { - assets: ['src/pyproject.toml', 'docs/CHANGELOG.md'], + assets: ['pyproject.toml', 'docs/CHANGELOG.md'], }, ], ], diff --git a/src/README.md b/src/README.md deleted file mode 100644 index c2a4dc65c..000000000 --- a/src/README.md +++ /dev/null @@ -1,12 +0,0 @@ -# Safe-DS Python Library - -[![PyPI](https://img.shields.io/pypi/v/safe-ds)](https://pypi.org/project/safe-ds/) -[![Main](https://github.com/Safe-DS/Stdlib/actions/workflows/main.yml/badge.svg)](https://github.com/Safe-DS/Stdlib/actions/workflows/main.yml) -[![codecov](https://codecov.io/gh/Safe-DS/Stdlib/branch/main/graph/badge.svg?token=HVRP1633B1)](https://codecov.io/gh/Safe-DS/Stdlib) -[![Documentation Status](https://readthedocs.org/projects/safe-ds-stdlib/badge/?version=latest)](https://safe-ds-stdlib.readthedocs.io/en/latest/?badge=latest) - -A user-friendly library for Data Science in Python. - -You can find the full documentation [here][docs]. - -[docs]: https://safe-ds-stdlib.readthedocs.io/en/latest/ diff --git a/src/poetry.lock b/src/poetry.lock deleted file mode 100644 index 7fbad4eb4..000000000 --- a/src/poetry.lock +++ /dev/null @@ -1,1117 +0,0 @@ -# This file is automatically @generated by Poetry and should not be changed by hand. - -[[package]] -name = "appnope" -version = "0.1.3" -description = "Disable App Nap on macOS >= 10.9" -category = "main" -optional = false 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tests/safeds/data/tabular/_column/test_get_value.py diff --git a/src/tests/data/tabular/_column/test_getitem.py b/tests/safeds/data/tabular/_column/test_getitem.py similarity index 100% rename from src/tests/data/tabular/_column/test_getitem.py rename to tests/safeds/data/tabular/_column/test_getitem.py diff --git a/src/tests/data/tabular/_column/test_has_missing_values.py b/tests/safeds/data/tabular/_column/test_has_missing_values.py similarity index 100% rename from src/tests/data/tabular/_column/test_has_missing_values.py rename to tests/safeds/data/tabular/_column/test_has_missing_values.py diff --git a/src/tests/data/tabular/_column/test_idness.py b/tests/safeds/data/tabular/_column/test_idness.py similarity index 100% rename from src/tests/data/tabular/_column/test_idness.py rename to tests/safeds/data/tabular/_column/test_idness.py diff --git a/src/tests/data/tabular/_column/test_max.py b/tests/safeds/data/tabular/_column/test_max.py similarity index 100% rename from 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b/tests/safeds/data/tabular/_table/test_list_columns_with_missing_values.py similarity index 100% rename from src/tests/data/tabular/_table/test_list_columns_with_missing_values.py rename to tests/safeds/data/tabular/_table/test_list_columns_with_missing_values.py diff --git a/src/tests/data/tabular/_table/test_list_columns_with_non_numerical_values.py b/tests/safeds/data/tabular/_table/test_list_columns_with_non_numerical_values.py similarity index 100% rename from src/tests/data/tabular/_table/test_list_columns_with_non_numerical_values.py rename to tests/safeds/data/tabular/_table/test_list_columns_with_non_numerical_values.py diff --git a/src/tests/data/tabular/_table/test_list_columns_with_numerical_values.py b/tests/safeds/data/tabular/_table/test_list_columns_with_numerical_values.py similarity index 100% rename from src/tests/data/tabular/_table/test_list_columns_with_numerical_values.py rename to tests/safeds/data/tabular/_table/test_list_columns_with_numerical_values.py diff 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rename from src/tests/data/tabular/_table/test_table_add_column.py rename to tests/safeds/data/tabular/_table/test_table_add_column.py diff --git a/src/tests/data/tabular/_table/test_transform_column.py b/tests/safeds/data/tabular/_table/test_transform_column.py similarity index 100% rename from src/tests/data/tabular/_table/test_transform_column.py rename to tests/safeds/data/tabular/_table/test_transform_column.py diff --git a/src/tests/data/tabular/_table/test_write_and_read.py b/tests/safeds/data/tabular/_table/test_write_and_read.py similarity index 100% rename from src/tests/data/tabular/_table/test_write_and_read.py rename to tests/safeds/data/tabular/_table/test_write_and_read.py diff --git a/src/tests/data/tabular/transformation/_imputer/__init__.py b/tests/safeds/data/tabular/transformation/__init__.py similarity index 100% rename from src/tests/data/tabular/transformation/_imputer/__init__.py rename to tests/safeds/data/tabular/transformation/__init__.py diff --git a/src/tests/data/tabular/transformation/_label_encoder/__init__.py b/tests/safeds/data/tabular/transformation/_imputer/__init__.py similarity index 100% rename from src/tests/data/tabular/transformation/_label_encoder/__init__.py rename to tests/safeds/data/tabular/transformation/_imputer/__init__.py diff --git a/src/tests/data/tabular/transformation/_imputer/test_imputer.py b/tests/safeds/data/tabular/transformation/_imputer/test_imputer.py similarity index 100% rename from src/tests/data/tabular/transformation/_imputer/test_imputer.py rename to tests/safeds/data/tabular/transformation/_imputer/test_imputer.py diff --git a/src/tests/data/tabular/transformation/_one_hot_encoder/__init__.py b/tests/safeds/data/tabular/transformation/_label_encoder/__init__.py similarity index 100% rename from src/tests/data/tabular/transformation/_one_hot_encoder/__init__.py rename to tests/safeds/data/tabular/transformation/_label_encoder/__init__.py diff --git a/src/tests/data/tabular/transformation/_label_encoder/test_fit_transform.py b/tests/safeds/data/tabular/transformation/_label_encoder/test_fit_transform.py similarity index 100% rename from src/tests/data/tabular/transformation/_label_encoder/test_fit_transform.py rename to tests/safeds/data/tabular/transformation/_label_encoder/test_fit_transform.py diff --git a/src/tests/data/tabular/transformation/_label_encoder/test_inverse_transform.py b/tests/safeds/data/tabular/transformation/_label_encoder/test_inverse_transform.py similarity index 100% rename from src/tests/data/tabular/transformation/_label_encoder/test_inverse_transform.py rename to tests/safeds/data/tabular/transformation/_label_encoder/test_inverse_transform.py diff --git a/src/tests/data/tabular/transformation/_label_encoder/test_transform.py b/tests/safeds/data/tabular/transformation/_label_encoder/test_transform.py similarity index 100% rename from src/tests/data/tabular/transformation/_label_encoder/test_transform.py rename to tests/safeds/data/tabular/transformation/_label_encoder/test_transform.py diff --git a/src/tests/data/tabular/transformation/_ordinal_encoder/__init__.py b/tests/safeds/data/tabular/transformation/_one_hot_encoder/__init__.py similarity index 100% rename from src/tests/data/tabular/transformation/_ordinal_encoder/__init__.py rename to tests/safeds/data/tabular/transformation/_one_hot_encoder/__init__.py diff --git a/src/tests/data/tabular/transformation/_one_hot_encoder/test_fit_transform.py b/tests/safeds/data/tabular/transformation/_one_hot_encoder/test_fit_transform.py similarity index 100% rename from src/tests/data/tabular/transformation/_one_hot_encoder/test_fit_transform.py rename to tests/safeds/data/tabular/transformation/_one_hot_encoder/test_fit_transform.py diff --git a/src/tests/data/tabular/transformation/_one_hot_encoder/test_inverse_transform.py b/tests/safeds/data/tabular/transformation/_one_hot_encoder/test_inverse_transform.py similarity index 100% rename from src/tests/data/tabular/transformation/_one_hot_encoder/test_inverse_transform.py rename to tests/safeds/data/tabular/transformation/_one_hot_encoder/test_inverse_transform.py diff --git a/src/tests/data/tabular/transformation/_one_hot_encoder/test_transform.py b/tests/safeds/data/tabular/transformation/_one_hot_encoder/test_transform.py similarity index 100% rename from src/tests/data/tabular/transformation/_one_hot_encoder/test_transform.py rename to tests/safeds/data/tabular/transformation/_one_hot_encoder/test_transform.py diff --git a/src/tests/data/tabular/typing/__init__.py b/tests/safeds/data/tabular/transformation/_ordinal_encoder/__init__.py similarity index 100% rename from src/tests/data/tabular/typing/__init__.py rename to tests/safeds/data/tabular/transformation/_ordinal_encoder/__init__.py diff --git a/src/tests/data/tabular/transformation/_ordinal_encoder/test_fit_transform.py b/tests/safeds/data/tabular/transformation/_ordinal_encoder/test_fit_transform.py 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a/src/tests/data/tabular/typing/_table_schema/__init__.py b/tests/safeds/data/tabular/typing/__init__.py similarity index 100% rename from src/tests/data/tabular/typing/_table_schema/__init__.py rename to tests/safeds/data/tabular/typing/__init__.py diff --git a/src/tests/ml/__init__.py b/tests/safeds/data/tabular/typing/_table_schema/__init__.py similarity index 100% rename from src/tests/ml/__init__.py rename to tests/safeds/data/tabular/typing/_table_schema/__init__.py diff --git a/src/tests/data/tabular/typing/_table_schema/test__str__.py b/tests/safeds/data/tabular/typing/_table_schema/test__str__.py similarity index 100% rename from src/tests/data/tabular/typing/_table_schema/test__str__.py rename to tests/safeds/data/tabular/typing/_table_schema/test__str__.py diff --git a/src/tests/data/tabular/typing/_table_schema/test_get_column_index_by_name.py b/tests/safeds/data/tabular/typing/_table_schema/test_get_column_index_by_name.py similarity index 100% rename from src/tests/data/tabular/typing/_table_schema/test_get_column_index_by_name.py rename to tests/safeds/data/tabular/typing/_table_schema/test_get_column_index_by_name.py diff --git a/src/tests/data/tabular/typing/_table_schema/test_get_column_type.py b/tests/safeds/data/tabular/typing/_table_schema/test_get_column_type.py similarity index 100% rename from src/tests/data/tabular/typing/_table_schema/test_get_column_type.py rename to tests/safeds/data/tabular/typing/_table_schema/test_get_column_type.py diff --git a/src/tests/data/tabular/typing/_table_schema/test_has_column.py b/tests/safeds/data/tabular/typing/_table_schema/test_has_column.py similarity index 100% rename from src/tests/data/tabular/typing/_table_schema/test_has_column.py rename to tests/safeds/data/tabular/typing/_table_schema/test_has_column.py diff --git a/src/tests/data/tabular/typing/_table_schema/test_table_equals.py b/tests/safeds/data/tabular/typing/_table_schema/test_table_equals.py similarity index 100% rename from src/tests/data/tabular/typing/_table_schema/test_table_equals.py rename to tests/safeds/data/tabular/typing/_table_schema/test_table_equals.py diff --git a/src/tests/ml/classification/__init__.py b/tests/safeds/ml/__init__.py similarity index 100% rename from src/tests/ml/classification/__init__.py rename to tests/safeds/ml/__init__.py diff --git a/src/tests/ml/classification/_ada_boost/__init__.py b/tests/safeds/ml/classification/__init__.py similarity index 100% rename from src/tests/ml/classification/_ada_boost/__init__.py rename to tests/safeds/ml/classification/__init__.py diff --git a/src/tests/ml/classification/_decision_tree/__init__.py b/tests/safeds/ml/classification/_ada_boost/__init__.py similarity index 100% rename from src/tests/ml/classification/_decision_tree/__init__.py rename to tests/safeds/ml/classification/_ada_boost/__init__.py diff --git a/src/tests/ml/classification/_ada_boost/test_fit.py b/tests/safeds/ml/classification/_ada_boost/test_fit.py similarity 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diff --git a/src/tests/ml/classification/_decision_tree/test_predict.py b/tests/safeds/ml/classification/_decision_tree/test_predict.py similarity index 100% rename from src/tests/ml/classification/_decision_tree/test_predict.py rename to tests/safeds/ml/classification/_decision_tree/test_predict.py diff --git a/src/tests/ml/classification/_k_nearest_neighbors/__init__.py b/tests/safeds/ml/classification/_gradient_boosting/__init__.py similarity index 100% rename from src/tests/ml/classification/_k_nearest_neighbors/__init__.py rename to tests/safeds/ml/classification/_gradient_boosting/__init__.py diff --git a/src/tests/ml/classification/_gradient_boosting/test_fit.py b/tests/safeds/ml/classification/_gradient_boosting/test_fit.py similarity index 100% rename from src/tests/ml/classification/_gradient_boosting/test_fit.py rename to tests/safeds/ml/classification/_gradient_boosting/test_fit.py diff --git a/src/tests/ml/classification/_gradient_boosting/test_predict.py b/tests/safeds/ml/classification/_gradient_boosting/test_predict.py similarity index 100% rename from src/tests/ml/classification/_gradient_boosting/test_predict.py rename to tests/safeds/ml/classification/_gradient_boosting/test_predict.py diff --git a/src/tests/ml/classification/_logistic_regression/__init__.py b/tests/safeds/ml/classification/_k_nearest_neighbors/__init__.py similarity index 100% rename from src/tests/ml/classification/_logistic_regression/__init__.py rename to tests/safeds/ml/classification/_k_nearest_neighbors/__init__.py diff --git a/src/tests/ml/classification/_k_nearest_neighbors/test_fit.py b/tests/safeds/ml/classification/_k_nearest_neighbors/test_fit.py similarity index 100% rename from src/tests/ml/classification/_k_nearest_neighbors/test_fit.py rename to tests/safeds/ml/classification/_k_nearest_neighbors/test_fit.py diff --git a/src/tests/ml/classification/_k_nearest_neighbors/test_predict.py 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