add get_fill_value Variable method and fill_value='default' option #172
Workflow file for this run
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| name: Wheels | |
| on: | |
| pull_request: | |
| push: | |
| tags: | |
| - "v*" | |
| release: | |
| types: | |
| - published | |
| permissions: | |
| contents: read | |
| jobs: | |
| build_sdist: | |
| name: Build source distribution | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| name: Install Python | |
| with: | |
| python-version: 3.x | |
| - name: Install APT packages | |
| if: contains(${{ matrix.os }}, 'ubuntu') | |
| run: | | |
| sudo apt update | |
| sudo apt install libhdf5-dev libnetcdf-dev | |
| - name: Build sdist | |
| run: > | |
| pip install build | |
| && python -m build --sdist . --outdir dist | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: pypi-artifacts | |
| path: ${{ github.workspace }}/dist/*.tar.gz | |
| build_bdist: | |
| name: "Build ${{ matrix.os }} (${{ matrix.arch }}) wheels" | |
| runs-on: ${{ matrix.os }} | |
| # Prevent hanging when building from emulation like aarch64. | |
| timeout-minutes: 300 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: ubuntu-22.04 | |
| arch: x86_64 | |
| - os: ubuntu-22.04 | |
| arch: aarch64 | |
| - os: macos-14 | |
| arch: arm64 | |
| CIBW_ENVIRONMENT: MACOSX_DEPLOYMENT_TARGET=14.0 | |
| - os: macos-12 | |
| arch: x86_64 | |
| CIBW_ENVIRONMENT: MACOSX_DEPLOYMENT_TARGET=12.0 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| # For aarch64 support | |
| # https://cibuildwheel.pypa.io/en/stable/faq/#emulation | |
| - uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: all | |
| if: runner.os == 'Linux' && matrix.arch == 'aarch64' | |
| - name: Build oldest and newest Python | |
| shell: bash | |
| # On PRs we run only oldest and newest Python versions to reduce CI load. | |
| # Skips pypy and musllinux everywhere. | |
| # We are buiding 38 and 312 for now. | |
| # These needs to rotate every new Python release. | |
| run: | | |
| if [[ "${{ github.event_name }}" == "pull_request" ]]; then | |
| CIBW_SKIP="pp* cp36-* cp37-* *-musllinux* cp39-* cp310-* cp311-*" | |
| else | |
| CIBW_SKIP="pp* cp36-* cp37-* *-musllinux*" | |
| fi | |
| echo "CIBW_SKIP=$CIBW_SKIP" >> $GITHUB_ENV | |
| echo "Setting CIBW_SKIP=$CIBW_SKIP" | |
| - name: "Building ${{ matrix.os }} (${{ matrix.arch }}) wheels" | |
| uses: pypa/[email protected] | |
| env: | |
| CIBW_SKIP: ${{ env.CIBW_SKIP }} | |
| CIBW_ARCHS: ${{ matrix.arch }} | |
| CIBW_BUILD_FRONTEND: build | |
| CIBW_MANYLINUX_X86_64_IMAGE: ghcr.io/ocefpaf/manylinux2014_x86_64-netcdf | |
| CIBW_MANYLINUX_AARCH64_IMAGE: ghcr.io/ocefpaf/manylinux2014_aarch64-netcdf | |
| # Emulation testing is slow, testing only latest Python. | |
| CIBW_TEST_SKIP: "cp38-*_aarch64 cp39-*_aarch64 cp310-*_aarch64 cp311-*_aarch64" | |
| CIBW_ENVIRONMENT: ${{ matrix.CIBW_ENVIRONMENT }} | |
| CIBW_BEFORE_BUILD_MACOS: brew install hdf5 netcdf | |
| CIBW_TEST_REQUIRES: pytest cython packaging | |
| CIBW_TEST_COMMAND: > | |
| python -c "import netCDF4; print(f'netCDF4 v{netCDF4.__version__}')" | |
| && pytest -s -rxs -v {project}/test | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: pypi-artifacts-${{ matrix.os }}-${{ matrix.arch }} | |
| path: ${{ github.workspace }}/wheelhouse/*.whl | |
| build_wheels_windows: | |
| name: Build wheels for ${{matrix.arch}} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [windows-latest] | |
| arch: [win_amd64] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| name: Install Python | |
| with: | |
| python-version: 3.x | |
| - name: Setup Micromamba Python ${{ matrix.python-version }} | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-name: build | |
| init-shell: bash | |
| create-args: >- | |
| python=${{ matrix.python-version }} libnetcdf=4.9.2 --channel conda-forge | |
| - name: Install cibuildwheel | |
| run: | | |
| python -m pip install --upgrade cibuildwheel delvewheel | |
| - name: Build wheels for Windows (${{ matrix.arch }}) | |
| run: cibuildwheel --output-dir wheelhouse | |
| env: | |
| CIBW_BUILD: "cp39-${{ matrix.arch }} cp310-${{ matrix.arch }} cp311-${{ matrix.arch }} cp312-${{ matrix.arch }}" | |
| CIBW_ENVIRONMENT_WINDOWS: > | |
| HDF5_DIR="C:\\Users\\runneradmin\\micromamba\\envs\\build\\Library" | |
| netCDF4_DIR="C:\\Users\\runneradmin\\micromamba\\envs\\build\\Library" | |
| PATH="C:\\Users\\runneradmin\\micromamba\\envs\\build\\Library\\bin;${PATH}" | |
| CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: > | |
| delvewheel show {wheel} | |
| && delvewheel repair -w {dest_dir} {wheel} | |
| CIBW_TEST_REQUIRES: pytest cython packaging | |
| CIBW_TEST_COMMAND: > | |
| python -c "import netCDF4; print(f'netCDF4 v{netCDF4.__version__}')" | |
| && pytest -s -rxs -v {project}\\test | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: pypi-artifacts-${{ matrix.os }}-${{ matrix.arch }} | |
| path: ${{ github.workspace }}/wheelhouse/*.whl | |
| show-artifacts: | |
| needs: [build_bdist, build_sdist, build_wheels_windows] | |
| name: "Show artifacts" | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| pattern: pypi-artifacts* | |
| path: ${{ github.workspace }}/dist | |
| merge-multiple: true | |
| - shell: bash | |
| run: | | |
| ls -lh ${{ github.workspace }}/dist | |
| publish-artifacts-pypi: | |
| needs: [build_bdist, build_sdist, build_wheels_windows] | |
| name: "Publish to PyPI" | |
| runs-on: ubuntu-22.04 | |
| # upload to PyPI for every tag starting with 'v' | |
| if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags/v') | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| pattern: pypi-artifacts* | |
| path: ${{ github.workspace }}/dist | |
| merge-multiple: true | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.PYPI_PASSWORD }} | |
| print_hash: true |