mimic_extract_env_py36.yml

name: mimic_data_extraction
channels:
  - conda-forge
  - defaults
dependencies:
  - boto3
  - botocore
  - cached-property
  - cchardet
  - certifi
  - click
  - cython-blis
  - datapackage
  - docutils
  - et_xmlfile
  - ijson
  - isodate
  - jdcal
  - jmespath
  - jsonlines
  - jsonpointer
  - linear-tsv
  - openpyxl
  - python_abi
  - rfc3986
  - s3transfer
  - spacy
  - sqlalchemy
  - srsly
  - tableschema
  - tabulator
  - thinc
  - unicodecsv
  - wasabi
  - xlrd
  - _libgcc_mutex
  - asn1crypto
  - attrs
  - backcall
  - blas
  - bleach
  - blosc
  - bzip2
  - ca-certificates
  - cffi
  - chardet
  - cryptography
  - cycler
  - cymem
  - cytoolz
  - decorator
  - defusedxml
  - dill
  - entrypoints
  - expat
  - fontconfig
  - freetype
  - glib
  - gst-plugins-base
  - gstreamer
  - hdf5
  - icu
  - idna
  - importlib-metadata
  - importlib_metadata
  - intel-openmp
  - ipykernel
  - ipython
  - ipython_genutils
  - ipywidgets
  - jedi
  - jinja2
  - jpeg
  - jsonschema
  - jupyter
  - jupyter_client
  - jupyter_console
  - jupyter_core
  - kiwisolver
  - krb5
  - libffi
  - libpng
  - libpq
  - libsodium
  - libxcb
  - libxml2
  - llvmlite
  - lzo
  - markupsafe
  - matplotlib
  - mistune
  - mkl
  - mkl_fft
  - mkl_random
  - msgpack-numpy
  - msgpack-python
  - murmurhash
  - nbconvert
  - nbformat
  - nltk
  - notebook
  - numba
  - numexpr
  - numpy
  - numpy-base
  - openssl
  - packaging
  - pandas
  - pandoc
  - pandocfilters
  - parso
  - pcre
  - pexpect
  - pickleshare
  - pip
  - plac
  - preshed
  - prometheus_client
  - prompt_toolkit
  - psycopg2
  - ptyprocess
  - pycparser
  - pygments
  - pyopenssl
  - pyparsing
  - pyqt
  - pyrsistent
  - pysocks
  - pytables
  - python=3.6.8
  - python-dateutil
  - pytz
  - pyzmq
  - qt
  - qtconsole
  - regex
  - requests
  - scikit-learn
  - scipy
  - send2trash
  - setuptools
  - sip
  - six
  - snappy
  - sqlite
  - terminado
  - testpath
  - tk
  - toolz
  - tornado
  - tqdm
  - traitlets
  - ujson
  - urllib3
  - wcwidth
  - webencodings
  - wheel
  - widgetsnbextension
  - wrapt
  - xz
  - zeromq
  - zipp
  - zlib
  - pip:
    - blis==0.4.1
    - catalogue==1.0.0
    - https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.1.0/en_core_web_sm-2.1.0.tar.gz
    - joblib==0.16.0
    - msgpack==0.6.1
    - nmslib==2.0.6
    - psutil==5.7.2
    - pybind11==2.5.0
    - pysbd==0.3.1
    - scispacy==0.2.5
    - tables==3.5.1
prefix: /afs/csail.mit.edu/u/m/mmd/.conda/envs/mimic_extract_py36