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    A series of methods and software tools have been proposed and developed for the operation, integration, and visualization of trees and data. This includes (1) the introduction of graphic grammar into the field of phylogeny for the first time, (2) enhancing the data integration ability of phylogenetics and its application in different disciplines, (3) proposing two universal methods for phylogenetic data integration and visualization, and (4) designing data structures that can store phylogenetic trees, related data, and visualization directives to ensure analytical reproducibility. This series of methods and software tools provide a concise and unified syntax as a whole system., which assists researchers in discovering hidden patterns and proposing new hypotheses by integrating heterogeneous data in the context of evolution or hierachy.

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