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short_read_blast_results.xml
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<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>blastn</BlastOutput_program>
<BlastOutput_version>BLASTN 2.12.0+</BlastOutput_version>
<BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>nr</BlastOutput_db>
<BlastOutput_query-ID>Query_35406</BlastOutput_query-ID>
<BlastOutput_query-def>M05164:33:000000000-BGDN6:1:1101:9154:2416</BlastOutput_query-def>
<BlastOutput_query-len>262</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_expect>10</Parameters_expect>
<Parameters_sc-match>2</Parameters_sc-match>
<Parameters_sc-mismatch>-3</Parameters_sc-mismatch>
<Parameters_gap-open>5</Parameters_gap-open>
<Parameters_gap-extend>2</Parameters_gap-extend>
<Parameters_filter>L;m;</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_query-ID>Query_35406</Iteration_query-ID>
<Iteration_query-def>M05164:33:000000000-BGDN6:1:1101:9154:2416</Iteration_query-def>
<Iteration_query-len>262</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|982198872|gb|CP013997.1|</Hit_id>
<Hit_def>Pseudomonas monteilii strain USDA-ARS-USMARC-56711, complete genome</Hit_def>
<Hit_accession>CP013997</Hit_accession>
<Hit_len>4714359</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>141.047</Hsp_bit-score>
<Hsp_score>155</Hsp_score>
<Hsp_evalue>7.08205e-29</Hsp_evalue>
<Hsp_query-from>51</Hsp_query-from>
<Hsp_query-to>254</Hsp_query-to>
<Hsp_hit-from>1687320</Hsp_hit-from>
<Hsp_hit-to>1687523</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>159</Hsp_identity>
<Hsp_positive>159</Hsp_positive>
<Hsp_gaps>6</Hsp_gaps>
<Hsp_align-len>207</Hsp_align-len>
<Hsp_qseq>CGACGCTCACCGAGCCACAGGGCCGCAGCGCGAG-GAGATGTTGTTGAACCTGGGCAGGCGCTTGTTCCGCCTGGACCGGCTCAATCAGCACGTCCGGGGCGATATCGCTG--CGCGTACCGCTTCGGGGCGGGGCGTCGATGAAATCGAAGTGAGCCTGGCCTACAGGATTCGTCTTGCCGCTGACCTGGATCTTCCTGCGCAGCC</Hsp_qseq>
<Hsp_hseq>CGACGCACAGCGGGCCACCGGGCCGCAGCGCGAGCGAGA-GCTGCTGACGCTCGGCAGGCGCCTGTTCCGTCTGGACCGGCTCGACCAGTTCGTCCGCGCCGACATCGCCGAACGCCT-GCGC-GCCGGCCAGGCCGTGGATGAGGTCGAGGTGAGTCTGGCCTACCGGGTGCGCCTGGCGCAGGAGCTGGACCTTCCTGCGCAGCC</Hsp_hseq>
<Hsp_midline>|||||| || || ||||| ||||||||||||||| |||| | || ||| || ||||||||| ||||||| |||||||||||| | ||| |||||| | ||| ||||| | ||| | ||| | || | || ||| ||||| |||| ||||| ||||||||| || | || || || || ||||| ||||||||||||||</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>71983277</Statistics_db-num>
<Statistics_db-len>604845190</Statistics_db-len>
<Statistics_hsp-len>0</Statistics_hsp-len>
<Statistics_eff-space>0</Statistics_eff-space>
<Statistics_kappa>0.41</Statistics_kappa>
<Statistics_lambda>0.625</Statistics_lambda>
<Statistics_entropy>0.78</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>2</Iteration_iter-num>
<Iteration_query-ID>Query_35407</Iteration_query-ID>
<Iteration_query-def>M05164:33:000000000-BGDN6:1:1101:16178:2450</Iteration_query-def>
<Iteration_query-len>269</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|1963973487|emb|LR991037.1|</Hit_id>
<Hit_def>Cosmia trapezina genome assembly, chromosome: 18</Hit_def>
<Hit_accession>LR991037</Hit_accession>
<Hit_len>26836480</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>44.5672</Hsp_bit-score>
<Hsp_score>48</Hsp_score>
<Hsp_evalue>4.32048</Hsp_evalue>
<Hsp_query-from>154</Hsp_query-from>
<Hsp_query-to>192</Hsp_query-to>
<Hsp_hit-from>1617750</Hsp_hit-from>
<Hsp_hit-to>1617713</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>-1</Hsp_hit-frame>
<Hsp_identity>35</Hsp_identity>
<Hsp_positive>35</Hsp_positive>
<Hsp_gaps>3</Hsp_gaps>
<Hsp_align-len>40</Hsp_align-len>
<Hsp_qseq>CGAACTCAACCTTTCGCCTGTGCATCCTCGC-TGTACACT</Hsp_qseq>
<Hsp_hseq>CGAACTCAACCTTTCGCC--TGGATCCTCGCATGTTCACT</Hsp_hseq>
<Hsp_midline>|||||||||||||||||| || |||||||| ||| ||||</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>71983277</Statistics_db-num>
<Statistics_db-len>604845190</Statistics_db-len>
<Statistics_hsp-len>0</Statistics_hsp-len>
<Statistics_eff-space>0</Statistics_eff-space>
<Statistics_kappa>0.41</Statistics_kappa>
<Statistics_lambda>0.625</Statistics_lambda>
<Statistics_entropy>0.78</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>3</Iteration_iter-num>
<Iteration_query-ID>Query_35408</Iteration_query-ID>
<Iteration_query-def>M05164:33:000000000-BGDN6:1:1101:16201:2387</Iteration_query-def>
<Iteration_query-len>272</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|982198872|gb|CP013997.1|</Hit_id>
<Hit_def>Pseudomonas monteilii strain USDA-ARS-USMARC-56711, complete genome</Hit_def>
<Hit_accession>CP013997</Hit_accession>
<Hit_len>4714359</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>126.62</Hsp_bit-score>
<Hsp_score>139</Hsp_score>
<Hsp_evalue>1.62956e-24</Hsp_evalue>
<Hsp_query-from>156</Hsp_query-from>
<Hsp_query-to>272</Hsp_query-to>
<Hsp_hit-from>2432709</Hsp_hit-from>
<Hsp_hit-to>2432593</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>-1</Hsp_hit-frame>
<Hsp_identity>98</Hsp_identity>
<Hsp_positive>98</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>117</Hsp_align-len>
<Hsp_qseq>TCACTCGATACCGGGCTCTTTCTTCAACCGCTTGACCAGCGCCTCGGCAACCGCCGCAGAAGAGGCCGGGTTCTGCCCGCTGACCAGATGCCCATCCTCGACCACGTAGCTGGTCCA</Hsp_qseq>
<Hsp_hseq>TCACTCGATGCCAGGCTCCTTCTCCAAACGCTTGATCAAGGCCTCGGCTACTGCCGCCGAGGAGGCCGGATTTTGCCCACTGACCAGATGACCATCCTCGATCACATAGCTGGCCCA</Hsp_hseq>
<Hsp_midline>||||||||| || ||||| |||| ||| ||||||| || |||||||| || ||||| || |||||||| || ||||| ||||||||||| |||||||||| ||| ||||||| |||</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>71983277</Statistics_db-num>
<Statistics_db-len>604845190</Statistics_db-len>
<Statistics_hsp-len>0</Statistics_hsp-len>
<Statistics_eff-space>0</Statistics_eff-space>
<Statistics_kappa>0.41</Statistics_kappa>
<Statistics_lambda>0.625</Statistics_lambda>
<Statistics_entropy>0.78</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>4</Iteration_iter-num>
<Iteration_query-ID>Query_35409</Iteration_query-ID>
<Iteration_query-def>M05164:33:000000000-BGDN6:1:1101:24424:2376</Iteration_query-def>
<Iteration_query-len>300</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gi|1524514342|gb|CP027762.1|</Hit_id>
<Hit_def>Pseudomonas sp. LBUM920 chromosome, complete genome</Hit_def>
<Hit_accession>CP027762</Hit_accession>
<Hit_len>6533866</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>244.741</Hsp_bit-score>
<Hsp_score>270</Hsp_score>
<Hsp_evalue>2.7031e-60</Hsp_evalue>
<Hsp_query-from>16</Hsp_query-from>
<Hsp_query-to>300</Hsp_query-to>
<Hsp_hit-from>3096633</Hsp_hit-from>
<Hsp_hit-to>3096349</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>-1</Hsp_hit-frame>
<Hsp_identity>225</Hsp_identity>
<Hsp_positive>225</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>285</Hsp_align-len>
<Hsp_qseq>GTGGACTGGGTCATCCATGCCGCCGCCATTACACGGCTGGATGGCGAAATCGATCAGATCTTTTCAGTCAATTACCTAGGCACCGAGCACGTCGTGCGGTTCGTGCAGCAAGCGGGCGTTCCGCTTTATCACATCAGTACGGCATTTACTCATCCCTGCGAGTATGCAGATGGGGTTCAGACGGAAACGCCTTACGAGGTCGCCAAGCGGCAGGCCGAGGTATTGGTGCGCACGTCAGGCATCGATGTCTCGATATTCCGCCCATCGATCATCATCGGCGATGCC</Hsp_qseq>
<Hsp_hseq>GTCGACTGGGTCATTCACGCCGCAGCGATTACCCGCATGGATGGCGACATCGACCAGATCTTTTCGGTCAATTACCTGGGTACCGAGAACGTCGTGCGCTTTGTGCAGCAAGCCAAGGTGCCGCTCTACCACATCAGCACCGCTTTCACCCACCCGTGCGACTACTACGAAGGCGTGCAGGCCGAGACGCCGTACGAAGTCGCCAAGCGCCAGGCCGAGACGCTGGTGCGTTCTTCCGGCATCGACGTGTCGATTTTTCGCCCGTCAATCATCATCGGCAATTCC</Hsp_hseq>
<Hsp_midline>|| ||||||||||| || ||||| || ||||| || |||||||||| ||||| ||||||||||| ||||||||||| || |||||| |||||||||| || ||||||||||| || ||||| || |||||||| || || || || || || ||||| || || || || ||| | || ||||| ||||| ||||||||||| ||||||||| ||||||| | || |||||||| || ||||| || ||||| || |||||||||||| || ||</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>71983277</Statistics_db-num>
<Statistics_db-len>604845190</Statistics_db-len>
<Statistics_hsp-len>0</Statistics_hsp-len>
<Statistics_eff-space>0</Statistics_eff-space>
<Statistics_kappa>0.41</Statistics_kappa>
<Statistics_lambda>0.625</Statistics_lambda>
<Statistics_entropy>0.78</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>