NAMESPACE

# Generated by roxygen2: do not edit by hand

export(addContrasts)
export(addDesign)
export(assertFeatureSubset)
export(assertSampleSubset)
export(blobs)
export(decodeFactor)
export(devROGER)
export(dfFactor2Str)
export(dfLogical2Int)
export(encodeFactor)
export(getUser)
export(importEdgeResult)
export(importLimmaResult)
export(maPhenoData)
export(maxContrastID)
export(maxDatasetID)
export(maxDesignID)
export(newContrastIDs)
export(newDatasetDesignID)
export(newDatasetID)
export(newDesignID)
export(readDfFromDb)
export(serializeMatrixByCol)
export(writeDfToDb)
import(DBI)
import(RSQLite)
importFrom(Biobase,`pData<-`)
importFrom(Biobase,exprs)
importFrom(Biobase,fData)
importFrom(Biobase,featureNames)
importFrom(Biobase,pData)
importFrom(Biobase,read.AnnotatedDataFrame)
importFrom(Biobase,sampleNames)
importFrom(DBI,dbConnect)
importFrom(DBI,dbGetQuery)
importFrom(DBI,dbReadTable)
importFrom(DBI,dbWriteTable)
importFrom(RSQLite,SQLite)
importFrom(blob,blob)
importFrom(limma,topTable)
importFrom(methods,is)
importFrom(ribiosExpression,contrastMatrix)
importFrom(ribiosExpression,contrastNames)
importFrom(ribiosExpression,designMatrix)
importFrom(ribiosExpression,limmaTopTable2dgeTable)
importFrom(ribiosNGS,dgeTable)
importFrom(ribiosNGS,featureNames)
importFrom(ribiosNGS,hasNoReplicate)
importFrom(ribiosUtils,matchColumn)
importFrom(ribiosUtils,pScore)
importFrom(ribiosUtils,putColsFirst)
importFrom(ribiosUtils,trim)
importFrom(testthat,expect_equal)