Protein vectors in protein-interaction-network

[datduong]

The paper cites the protein vectors in Alshahrani,M. et al. (2017). Did you use exactly the same vectors by Alshahrani,M. et al. (2017)? In this paper Alshahrani,M. et al. (2017), there 6 other databases which were used to encode proteins into vectors. So just to confirm, are the protein vectors contain only data from interaction-network, or from other additional sources? Thanks.

[coolmaksat]

No, we have built a new graph from PPI and orthology links from EGGNOG

[datduong]

Awesome. Thanks. One last question, is the method applied to your own PPI data exactly the same as Alshahrani,M. et al. (2017)?