Skip to content

Issues: biosustain/cameo

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

39 Open 63 Closed
39 Open 63 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Deprecated feature in cobrapy package
#299 opened Oct 5, 2022 by almironeto
1
Unable to run cameo design API
#298 opened Sep 23, 2022 by SiYeon-Ju
1
find_gene_knockout_reactions is deprecated in cobrapy 0.25.0
#296 opened Jun 27, 2022 by glucksfall
OptKnock does not run on the models. Attribute Error displayed.
#295 opened May 12, 2022 by dahalsanjeev
optgene.run() not working with growth_coupled=True
#291 opened Nov 30, 2021 by jafemm
CPLEX failing on CI
#290 opened Nov 25, 2021 by carrascomj
pathways.plot_production_envelopes() does not pass plotter to plot()
#288 opened Nov 24, 2021 by djinnome
Fix openbabel test
#282 opened Jul 21, 2021 by carrascomj
@carrascomj
Different knockouts strategies
#280 opened Jun 25, 2021 by j-alex-vindel
Update documentation
#268 opened Nov 10, 2020 by carrascomj
3 of 5 tasks
@carrascomj
solver(s) question
#260 opened Sep 19, 2020 by picousse
8
No support for pathlib.Path on model loading
#258 opened Jul 26, 2020 by matthiaskoenig
FSEOF
#254 opened Jun 12, 2020 by weif000
1
Installation problems
#252 opened Mar 25, 2020 by danolson1
3
Some pathway predictions result in an infinite loop
#249 opened Oct 8, 2019 by kvikshaug
Differential FVA should exclude constrained reactions
#244 opened Jun 27, 2019 by Midnighter
@Midnighter
Max flux value in http://cameo.bio/07-predict-heterologous-pathways.html
#238 opened Mar 22, 2019 by mauriceling
3
Unable to run cameo design --product vanillin
#236 opened Mar 22, 2019 by mauriceling
5
install problems / jupyter
#216 opened Nov 20, 2018 by ghost
2
"Failed to display Jupyter Widget" on online documentation
#214 opened Aug 27, 2018 by bdelepine
1
Fix the use of symengine in cameo
#212 opened Jul 29, 2018 by Midnighter COBRApy 1.0
@phantomas1234
Refactor the model loading code into cobrapy
#211 opened Jul 29, 2018 by Midnighter COBRApy 1.0
how to keep metanetx_universal_model_bigg_rhea_kegg_brenda database updated with metanetx database enhancement
#204 opened Mar 29, 2018 by chang88ye
3
Issues loading a local model
#203 opened Mar 8, 2018 by navborg
2
Fix notebook 9 (vanillin example) bug
#201 opened Feb 6, 2018 by phantomas1234
@the-code-magician
ProTip! Type g i on any issue or pull request to go back to the issue listing page.