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sv_pipeline_docker.yml
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Fix multiallelic genotypes for biallelic CNVs Docker Images #920: Pull request #748 synchronize by kjaisingh
November 15, 2024 15:23 6m 53s kj_fix_retained_multiallelic_genos
kj_fix_retained_multiallelic_genos
November 15, 2024 15:23 6m 53s
Migrate CleanVcf into GATK Docker Images #919: Pull request #733 synchronize by kjaisingh
November 12, 2024 16:55 6m 28s kj_sv_cleanvcf
kj_sv_cleanvcf
November 12, 2024 16:55 6m 28s
Modify EvidenceQC to not create/expect additional column in median co… Docker Images #918: Commit 62adb32 pushed by kjaisingh
November 9, 2024 01:59 3d 12h 51m 5s main
main
November 9, 2024 01:59 3d 12h 51m 5s
Modify EvidenceQC to not create/expect additional column in median coverage file Docker Images #917: Pull request #745 synchronize by kjaisingh
November 8, 2024 00:16 6m 54s kj_remove_sample_id_column
kj_remove_sample_id_column
November 8, 2024 00:16 6m 54s
Modify EvidenceQC to not create/expect additional column in median coverage file Docker Images #915: Pull request #745 opened by kjaisingh
November 7, 2024 17:16 7m 16s kj_remove_sample_id_column
kj_remove_sample_id_column
November 7, 2024 17:16 7m 16s
use chrX and chrY to match sex chromosomes Docker Images #914: Pull request #713 synchronize by CuriousTim
November 7, 2024 03:55 7m 24s CuriousTim:main
CuriousTim:main
November 7, 2024 03:55 7m 24s
Minor bugfix to pre-set column type in GenerateBatchMetrics (#743) Docker Images #913: Commit bf73774 pushed by kjaisingh
November 5, 2024 00:18 15h 54m 13s main
main
November 5, 2024 00:18 15h 54m 13s
Fix for normalize_counts() in GenerateBatchMetrics Docker Images #912: Pull request #743 opened by kjaisingh
November 4, 2024 16:36 6m 36s kj_petest_fix_type
kj_petest_fix_type
November 4, 2024 16:36 6m 36s
Migrate CleanVcf into GATK Docker Images #911: Pull request #733 synchronize by kjaisingh
November 4, 2024 15:05 6m 12s kj_sv_cleanvcf
kj_sv_cleanvcf
November 4, 2024 15:05 6m 12s
Migrate CleanVcf into GATK Docker Images #910: Pull request #733 synchronize by kjaisingh
November 1, 2024 20:06 6m 43s kj_sv_cleanvcf
kj_sv_cleanvcf
November 1, 2024 20:06 6m 43s
Migrate CleanVcf into GATK Docker Images #909: Pull request #733 synchronize by kjaisingh
November 1, 2024 17:43 6m 12s kj_sv_cleanvcf
kj_sv_cleanvcf
November 1, 2024 17:43 6m 12s
Migrate CleanVcf into GATK Docker Images #908: Pull request #733 synchronize by kjaisingh
November 1, 2024 16:47 6m 24s kj_sv_cleanvcf
kj_sv_cleanvcf
November 1, 2024 16:47 6m 24s
Migrate CleanVcf into GATK Docker Images #907: Pull request #733 synchronize by kjaisingh
November 1, 2024 16:31 6m 52s kj_sv_cleanvcf
kj_sv_cleanvcf
November 1, 2024 16:31 6m 52s
Migrate CleanVcf into GATK Docker Images #906: Pull request #733 synchronize by kjaisingh
November 1, 2024 15:45 6m 17s kj_sv_cleanvcf
kj_sv_cleanvcf
November 1, 2024 15:45 6m 17s
Update CombineBatches workflow Docker Images #905: Pull request #732 synchronize by mwalker174
November 1, 2024 15:40 6m 48s mw_gatk_combine_batches
mw_gatk_combine_batches
November 1, 2024 15:40 6m 48s
Remove internal workflows and scripts Docker Images #904: Pull request #742 synchronize by mwalker174
October 31, 2024 21:12 40s mw_release_cleanup
mw_release_cleanup
October 31, 2024 21:12 40s
Remove internal workflows and scripts Docker Images #903: Pull request #742 opened by mwalker174
October 31, 2024 20:52 34s mw_release_cleanup
mw_release_cleanup
October 31, 2024 20:52 34s
Refine complex variants and translocations (#736) Docker Images #902: Commit d532812 pushed by epiercehoffman
October 29, 2024 16:34 14m 32s main
main
October 29, 2024 16:34 14m 32s
Filter outlier samples in TrainGCNV and GenerateBatchMetrics Docker Images #901: Pull request #717 synchronize by kjaisingh
October 28, 2024 22:42 6m 27s kj/44_outlier_sample_removal
kj/44_outlier_sample_removal
October 28, 2024 22:42 6m 27s
Refine complex variants and translocations Docker Images #900: Pull request #736 synchronize by epiercehoffman
October 28, 2024 22:32 6m 11s eph_refine_cpx
eph_refine_cpx
October 28, 2024 22:32 6m 11s
Refine complex variants and translocations Docker Images #899: Pull request #736 synchronize by epiercehoffman
October 28, 2024 17:57 6m 33s eph_refine_cpx
eph_refine_cpx
October 28, 2024 17:57 6m 33s
Add check for duplicate records to MainVcfQc (#705) Docker Images #898: Commit 245c01a pushed by kjaisingh
October 28, 2024 17:00 30d 0h 0m 20s main
main
October 28, 2024 17:00 30d 0h 0m 20s
Retain empty genotypes in CleanVcf part 5 (#738) Docker Images #897: Commit 4c9febd pushed by mwalker174
October 28, 2024 16:39 45m 44s main
main
October 28, 2024 16:39 45m 44s
Update Scramble implementation (#722) Docker Images #896: Commit 5ea22a5 pushed by mwalker174
October 25, 2024 15:41 2h 21m 55s main
main
October 25, 2024 15:41 2h 21m 55s
Leave empty genotypes in CleanVcf part 5 Docker Images #895: Pull request #738 synchronize by mwalker174
October 25, 2024 14:34 7m 22s mw_unassigned_sex_bug
mw_unassigned_sex_bug
October 25, 2024 14:34 7m 22s