Skip to content

Actions: broadinstitute/gatk

Actions

Build and Test GATK 4

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
gatk-tests.yml
1,567 workflow runs
1,567 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Add SVStratify and GroupedSVCluster tools (#8990) Build and Test GATK 4 #4893: Commit 3bb2b8b pushed by mwalker174
November 18, 2024 17:48 51m 22s master
master
November 18, 2024 17:48 51m 22s
VariantRecalibrator R script fix for recent R versions. Build and Test GATK 4 #4892: Pull request #9046 opened by gokalpcelik
November 18, 2024 17:42 52m 42s gc_vqsr_R_Script_update
gc_vqsr_R_Script_update
November 18, 2024 17:42 52m 42s
[DO NOT MERGE] Build and Test GATK 4 #4891: Pull request #9045 synchronize by jamesemery
November 18, 2024 16:14 31m 4s je_updateCondaEnvironment
je_updateCondaEnvironment
November 18, 2024 16:14 31m 4s
[DO NOT MERGE] Build and Test GATK 4 #4890: Pull request #9045 synchronize by jamesemery
November 18, 2024 15:10 31m 28s je_updateCondaEnvironment
je_updateCondaEnvironment
November 18, 2024 15:10 31m 28s
Maximum alt alleles guardrail [VS-1530] Build and Test GATK 4 #4889: Pull request #9033 synchronize by mcovarr
November 15, 2024 21:01 2h 21m 22s vs_1491_max_alt_alleles_guardrail
vs_1491_max_alt_alleles_guardrail
November 15, 2024 21:01 2h 21m 22s
Maximum alt alleles guardrail [VS-1530] Build and Test GATK 4 #4888: Pull request #9033 synchronize by mcovarr
November 15, 2024 21:01 2h 25m 26s vs_1491_max_alt_alleles_guardrail
vs_1491_max_alt_alleles_guardrail
November 15, 2024 21:01 2h 25m 26s
[DO NOT MERGE] Build and Test GATK 4 #4887: Pull request #9045 synchronize by jamesemery
November 15, 2024 19:51 30m 58s je_updateCondaEnvironment
je_updateCondaEnvironment
November 15, 2024 19:51 30m 58s
[DO NOT MERGE] Build and Test GATK 4 #4886: Pull request #9045 synchronize by jamesemery
November 15, 2024 18:24 53m 2s je_updateCondaEnvironment
je_updateCondaEnvironment
November 15, 2024 18:24 53m 2s
[DO NOT MERGE] Build and Test GATK 4 #4885: Pull request #9045 synchronize by jamesemery
November 15, 2024 17:05 52m 44s je_updateCondaEnvironment
je_updateCondaEnvironment
November 15, 2024 17:05 52m 44s
[DO NOT MERGE] Build and Test GATK 4 #4884: Pull request #9045 synchronize by jamesemery
November 15, 2024 16:53 53m 5s je_updateCondaEnvironment
je_updateCondaEnvironment
November 15, 2024 16:53 53m 5s
[DO NOT MERGE] Build and Test GATK 4 #4883: Pull request #9045 synchronize by jamesemery
November 15, 2024 16:35 31m 12s je_updateCondaEnvironment
je_updateCondaEnvironment
November 15, 2024 16:35 31m 12s
[DO NOT MERGE] Build and Test GATK 4 #4882: Pull request #9045 opened by jamesemery
November 15, 2024 16:15 31m 37s je_updateCondaEnvironment
je_updateCondaEnvironment
November 15, 2024 16:15 31m 37s
VS-1515 - Passing ploidy_table_name into GvsExtractCallset.wdl Build and Test GATK 4 #4881: Pull request #9044 opened by gbggrant
November 14, 2024 16:44 2h 9m 29s gg_VS-1515_ExposePloidyOption
gg_VS-1515_ExposePloidyOption
November 14, 2024 16:44 2h 9m 29s
VS-1490 - Refactor python code from extract dir into a scripts directory. Build and Test GATK 4 #4880: Pull request #9017 synchronize by gbggrant
November 13, 2024 22:18 2h 59m 10s gg_VS-1490_RefactorPython
gg_VS-1490_RefactorPython
November 13, 2024 22:18 2h 59m 10s
VS-1490 - Refactor python code from extract dir into a scripts directory. Build and Test GATK 4 #4879: Pull request #9017 synchronize by gbggrant
November 13, 2024 21:23 2h 35m 7s gg_VS-1490_RefactorPython
gg_VS-1490_RefactorPython
November 13, 2024 21:23 2h 35m 7s
Dockstore bugfix Build and Test GATK 4 #4878: Pull request #9042 opened by RoriCremer
November 13, 2024 20:27 2h 38m 52s rc-dockstore-bugfix
rc-dockstore-bugfix
November 13, 2024 20:27 2h 38m 52s
VS 1528 Update the sharding of the samples in the VAT creation to be dependent on the number of samples Build and Test GATK 4 #4877: Pull request #9039 synchronize by RoriCremer
November 13, 2024 19:49 2h 52m 42s rc-1528-n-rounds-update
rc-1528-n-rounds-update
November 13, 2024 19:49 2h 52m 42s
VS 1528 Update the sharding of the samples in the VAT creation to be dependent on the number of samples Build and Test GATK 4 #4876: Pull request #9039 synchronize by RoriCremer
November 13, 2024 19:35 2h 25m 4s rc-1528-n-rounds-update
rc-1528-n-rounds-update
November 13, 2024 19:35 2h 25m 4s
Retain all source IDs on VariantContext (#9032) Build and Test GATK 4 #4875: Commit 18707c6 pushed by lbergelson
November 13, 2024 19:00 51m 37s master
master
November 13, 2024 19:00 51m 37s
Running tests Build and Test GATK 4 #4874: Pull request #9040 opened by lbergelson
November 13, 2024 18:01 54m 53s lb_source_merge2
lb_source_merge2
November 13, 2024 18:01 54m 53s
VS-1490 - Refactor python code from extract dir into a scripts directory. Build and Test GATK 4 #4873: Pull request #9017 synchronize by gbggrant
November 13, 2024 15:16 2h 39m 8s gg_VS-1490_RefactorPython
gg_VS-1490_RefactorPython
November 13, 2024 15:16 2h 39m 8s
VS-1526 - Fix error in Extract Manifest Creation causing it to run forever. Build and Test GATK 4 #4872: Pull request #9034 synchronize by gbggrant
November 13, 2024 15:13 3h 13m 45s gg_VS-1526_DontRunForever
gg_VS-1526_DontRunForever
November 13, 2024 15:13 3h 13m 45s
VS 1528 Update the sharding of the samples in the VAT creation to be dependent on the number of samples Build and Test GATK 4 #4871: Pull request #9039 opened by RoriCremer
November 13, 2024 04:13 2h 49m 24s rc-1528-n-rounds-update
rc-1528-n-rounds-update
November 13, 2024 04:13 2h 49m 24s
Add a few additional failures to our notes doc Build and Test GATK 4 #4870: Pull request #8980 synchronize by RoriCremer
November 13, 2024 03:23 3h 0m 49s rc-1464-beta-failures
rc-1464-beta-failures
November 13, 2024 03:23 3h 0m 49s
RW-11727 pass query_project instead Build and Test GATK 4 #4869: Pull request #9036 synchronize by mcovarr
November 12, 2024 20:39 2h 49m 22s qi-attempt
qi-attempt
November 12, 2024 20:39 2h 49m 22s