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Kvg clean read bubbles (#42) CI/CD #99: Commit f8f4021 pushed by kvg
November 11, 2024 14:26 11m 17s main
main
November 11, 2024 14:26 11m 17s
Kvg clean read bubbles (#42) Build and deploy site to GitHub Pages #68: Commit f8f4021 pushed by kvg
November 11, 2024 14:26 3m 7s main
main
November 11, 2024 14:26 3m 7s
Merge branch 'main' into kvg_clean_read_bubbles CI #217: Commit de89873 pushed by kvg
November 11, 2024 14:14 7m 5s kvg_clean_read_bubbles
kvg_clean_read_bubbles
November 11, 2024 14:14 7m 5s
Only replace poor-scoring read paths CI #216: Commit d44983d pushed by kvg
November 11, 2024 05:13 5m 29s kvg_clean_read_bubbles
kvg_clean_read_bubbles
November 11, 2024 05:13 5m 29s
Correct reads by popping bubbles induced against the cleaned graph CI #215: Commit ce5189d pushed by kvg
November 11, 2024 03:46 9m 22s kvg_clean_read_bubbles
kvg_clean_read_bubbles
November 11, 2024 03:46 9m 22s
Having a default chrom name when iterating through short reads record… CI #214: Commit 2d1f973 pushed by bshifaw
November 7, 2024 19:43 5m 12s bs_kvg_improve_model
bs_kvg_improve_model
November 7, 2024 19:43 5m 12s
Adding option to search all short reads for rescue command CI #213: Commit 3ea3332 pushed by bshifaw
November 5, 2024 20:16 5m 0s bs_kvg_improve_model
bs_kvg_improve_model
November 5, 2024 20:16 5m 0s
pages build and deployment pages-build-deployment #46: by github-pages bot
November 4, 2024 16:18 34s gh-pages
gh-pages
November 4, 2024 16:18 34s
Kvg improve coassemble (#40) Build and deploy site to GitHub Pages #67: Commit ba7938d pushed by kvg
November 4, 2024 16:15 3m 12s main
main
November 4, 2024 16:15 3m 12s
Kvg improve coassemble (#40) CI/CD #98: Commit ba7938d pushed by kvg
November 4, 2024 16:15 11m 42s main
main
November 4, 2024 16:15 11m 42s
Improvements to training, simplification CI #212: Commit 7b99e01 pushed by kvg
November 4, 2024 14:56 5m 58s kvg_improve_coassemble
kvg_improve_coassemble
November 4, 2024 14:56 5m 58s
Added function comments CI #211: Commit 3fd7427 pushed by bshifaw
October 29, 2024 21:06 8m 3s bs_kvg_improve_model
bs_kvg_improve_model
October 29, 2024 21:06 8m 3s
Correct the short reads as well CI #210: Commit d235d8b pushed by kvg
October 28, 2024 01:05 4m 17s kvg_improve_coassemble
kvg_improve_coassemble
October 28, 2024 01:05 4m 17s
Small improvements to superbubble cleaning CI #209: Commit a2eb8b7 pushed by kvg
October 27, 2024 16:57 2m 51s kvg_improve_coassemble
kvg_improve_coassemble
October 27, 2024 16:57 2m 51s
Placeholder CI #208: Commit c911d4f pushed by kvg
October 27, 2024 15:55 2m 53s kvg_improve_coassemble
kvg_improve_coassemble
October 27, 2024 15:55 2m 53s
Improved error cleaning CI #207: Commit e70b978 pushed by kvg
October 27, 2024 05:11 4m 8s kvg_improve_coassemble
kvg_improve_coassemble
October 27, 2024 05:11 4m 8s
Merge onto latest version of main CI #206: Commit 9ad4760 pushed by kvg
October 26, 2024 00:33 4m 36s kvg_improve_coassemble
kvg_improve_coassemble
October 26, 2024 00:33 4m 36s
pages build and deployment pages-build-deployment #45: by github-pages bot
October 26, 2024 00:19 29s gh-pages
gh-pages
October 26, 2024 00:19 29s
Reverted rescue.rs to version that doesn't attempt to guess locations… CI/CD #97: Commit 01cf609 pushed by kvg
October 26, 2024 00:16 11m 14s main
main
October 26, 2024 00:16 11m 14s
Reverted rescue.rs to version that doesn't attempt to guess locations… Build and deploy site to GitHub Pages #66: Commit 01cf609 pushed by kvg
October 26, 2024 00:16 3m 4s main
main
October 26, 2024 00:16 3m 4s
Experimenting with cleaning CI #205: Commit c9342f8 pushed by kvg
October 26, 2024 00:11 3m 44s kvg_improve_coassemble
kvg_improve_coassemble
October 26, 2024 00:11 3m 44s
Improve alignment trimming for proper variant characterization CI #204: Commit 45b9302 pushed by kvg
October 25, 2024 23:09 4m 24s kvg_improve_coassemble
kvg_improve_coassemble
October 25, 2024 23:09 4m 24s
Discard reads that have any non-A/C/G/T bases. CI #203: Commit 1fa4126 pushed by kvg
October 25, 2024 03:21 2m 54s kvg_improve_coassemble
kvg_improve_coassemble
October 25, 2024 03:21 2m 54s
Fixed an issue where unmapped reads don't have a tid, thus can't be d… CI #202: Commit 600c14f pushed by kvg
October 24, 2024 15:38 7m 9s kvg_improve_coassemble
kvg_improve_coassemble
October 24, 2024 15:38 7m 9s
WIP on a smarter read rescuing process CI #201: Commit 1b2936f pushed by kvg
October 24, 2024 00:36 4m 55s kvg_improve_model
kvg_improve_model
October 24, 2024 00:36 4m 55s