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Releases: broadinstitute/hidive

v0.1.62

27 Aug 21:27
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Fix Docker build issue in previous version (#22)

  • add abpoa functions in replace of spoa

  • revise docker

v0.1.61

27 Aug 20:21
a6e7c15
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Fixed some build issues (#23)

v0.1.60

27 Aug 02:25
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Kvg rescue and filter (#21)

  • A completely written (and now working) read error corrector

  • Rewrote filter command to further filter rescued reads by alignment to a draft assembly of long reads

v0.1.59

14 Aug 20:17
2aeeb2a
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Added KNN and MIP function to assemble.rs. (#20)

v0.1.58

07 Aug 12:06
3e8eff5
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Kvg clean graph (#19)

  • Implemented tip cleaning, graph cleaning, and read correction

v0.1.57

01 Aug 05:54
75a48e2
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Maybe even smaller image (#18)

Reduced Docker image size to 138MB.

v0.1.56

01 Aug 05:24
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Kvg cleanup (#17)

Reduce Docker image size by a factor of 10.

v0.1.55

01 Aug 03:43
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Train a graph error-cleaning model with GBDT

v0.1.54

29 Jul 16:01
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Kvg coassemble (#16)

  • First (kinda working) version of coassemble

v0.1.53

28 Jul 15:25
71dbc24
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New command that finds short reads that share kmers with long reads s… (#15)

  • New command that finds short reads that share kmers with long reads spanning a locus of interest