v0.5.21

Minor cleanup. (#114)

• Shortened help messages so that they fit on-screen without auto-truncation by Click.
• Rename correct_tag to correct.

v0.5.20

Generalization to demultiplexing. (#113)

• Moved core logic of array-based demultiplexing to annotate command.
• Demultiplex now splits a BAM based on a read tag (e.g. YN for model name).
• Added a test for retrieving model information from a BAM header, JSON file, or a specified model name.

v0.5.19

Fixing issue with user-defined models. (#112)

v0.5.18

Add Starcode to Docker image (#111)

v0.5.17

Correct tag (#110)

• Correct an arbitrary tag (e.g. CR, BC) to a whitelist using Starcode.

v0.5.16

Add tool to process fastq files (#109)

v0.5.15

scRNA 10x5p model (#108)

• Add a model to allow processing of a raw 10x 5' library (w/o MAS-seq)

v0.5.14

Fixing issue with read name hashing in Segment. (#107)

• Updated hashing for read names when segmenting so that there are
  many fewer collisions.

v0.5.13

Added command to pad barcodes by a specified number of bases (#106)

v0.5.12

Fixed a model autodetection bug. (#105)