convnet_builder.py

# Copyright 2017 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# ==============================================================================
"""CNN builder."""

from __future__ import print_function

from collections import defaultdict
import contextlib

import numpy as np

import tensorflow as tf

from tensorflow.python.layers import convolutional as conv_layers
from tensorflow.python.layers import core as core_layers
from tensorflow.python.layers import pooling as pooling_layers
from tensorflow.python.training import moving_averages


class ConvNetBuilder(object):
  """Builder of cnn net."""

  def __init__(self,
               input_op,
               input_nchan,
               phase_train,
               use_tf_layers,
               data_format='NCHW',
               dtype=tf.float32,
               variable_dtype=tf.float32):
    self.top_layer = input_op
    self.top_size = input_nchan
    self.phase_train = phase_train
    self.use_tf_layers = use_tf_layers
    self.data_format = data_format
    self.dtype = dtype
    self.variable_dtype = variable_dtype
    self.counts = defaultdict(lambda: 0)
    self.use_batch_norm = False
    self.batch_norm_config = {}  # 'decay': 0.997, 'scale': True}
    self.channel_pos = ('channels_last'
                        if data_format == 'NHWC' else 'channels_first')
    self.aux_top_layer = None
    self.aux_top_size = 0

  @contextlib.contextmanager
  def switch_to_aux_top_layer(self):
    """Context that construct cnn in the auxiliary arm."""
    if self.aux_top_layer is None:
      raise RuntimeError('Empty auxiliary top layer in the network.')
    saved_top_layer = self.top_layer
    saved_top_size = self.top_size
    self.top_layer = self.aux_top_layer
    self.top_size = self.aux_top_size
    yield
    self.aux_top_layer = self.top_layer
    self.aux_top_size = self.top_size
    self.top_layer = saved_top_layer
    self.top_size = saved_top_size

  def get_variable(self, name, shape, dtype, cast_dtype, *args, **kwargs):
    # TODO(reedwm): Currently variables and gradients are transferred to other
    # devices and machines as type `dtype`, not `cast_dtype`. In particular,
    # this means in fp16 mode, variables are transferred as fp32 values, not
    # fp16 values, which uses extra bandwidth.
    var = tf.get_variable(name, shape, dtype, *args, **kwargs)
    return tf.cast(var, cast_dtype)

  def _conv2d_impl(self, input_layer, num_channels_in, filters, kernel_size,
                   strides, padding, kernel_initializer):
    if self.use_tf_layers:
      return conv_layers.conv2d(input_layer, filters, kernel_size, strides,
                                padding, self.channel_pos,
                                kernel_initializer=kernel_initializer,
                                use_bias=False)
    else:
      weights_shape = [kernel_size[0], kernel_size[1], num_channels_in, filters]
      # We use the name 'conv2d/kernel' so the variable has the same name as its
      # tf.layers equivalent. This way, if a checkpoint is written when
      # self.use_tf_layers == True, it can be loaded when
      # self.use_tf_layers == False, and vice versa.
      weights = self.get_variable('conv2d/kernel', weights_shape,
                                  self.variable_dtype, self.dtype,
                                  initializer=kernel_initializer)
      if self.data_format == 'NHWC':
        strides = [1] + strides + [1]
      else:
        strides = [1, 1] + strides
      return tf.nn.conv2d(input_layer, weights, strides, padding,
                          data_format=self.data_format)

  def conv(self,
           num_out_channels,
           k_height,
           k_width,
           d_height=1,
           d_width=1,
           mode='SAME',
           input_layer=None,
           num_channels_in=None,
           use_batch_norm=None,
           stddev=None,
           activation='relu',
           bias=0.0):
    """Construct a conv2d layer on top of cnn."""
    if input_layer is None:
      input_layer = self.top_layer
    if num_channels_in is None:
      num_channels_in = self.top_size
    kernel_initializer = None
    if stddev is not None:
      kernel_initializer = tf.truncated_normal_initializer(stddev=stddev)
    name = 'conv' + str(self.counts['conv'])
    self.counts['conv'] += 1
    with tf.variable_scope(name):
      strides = [1, d_height, d_width, 1]
      if self.data_format == 'NCHW':
        strides = [strides[0], strides[3], strides[1], strides[2]]
      if mode != 'SAME_RESNET':
        conv = self._conv2d_impl(input_layer, num_channels_in, num_out_channels,
                                 kernel_size=[k_height, k_width],
                                 strides=[d_height, d_width], padding=mode,
                                 kernel_initializer=kernel_initializer)
      else:  # Special padding mode for ResNet models
        if d_height == 1 and d_width == 1:
          conv = self._conv2d_impl(input_layer, num_channels_in,
                                   num_out_channels,
                                   kernel_size=[k_height, k_width],
                                   strides=[d_height, d_width], padding='SAME',
                                   kernel_initializer=kernel_initializer)
        else:
          rate = 1  # Unused (for 'a trous' convolutions)
          kernel_size_effective = k_height + (k_width - 1) * (rate - 1)
          pad_total = kernel_size_effective - 1
          pad_beg = pad_total // 2
          pad_end = pad_total - pad_beg
          padding = [[0, 0], [pad_beg, pad_end], [pad_beg, pad_end], [0, 0]]
          if self.data_format == 'NCHW':
            padding = [padding[0], padding[3], padding[1], padding[2]]
          input_layer = tf.pad(input_layer, padding)
          conv = self._conv2d_impl(input_layer, num_channels_in,
                                   num_out_channels,
                                   kernel_size=[k_height, k_width],
                                   strides=[d_height, d_width], padding='VALID',
                                   kernel_initializer=kernel_initializer)
      if use_batch_norm is None:
        use_batch_norm = self.use_batch_norm
      if not use_batch_norm:
        if bias is not None:
          biases = self.get_variable('biases', [num_out_channels],
                                     self.variable_dtype, self.dtype,
                                     initializer=tf.constant_initializer(bias))
          biased = tf.reshape(
              tf.nn.bias_add(conv, biases, data_format=self.data_format),
              conv.get_shape())
        else:
          biased = conv
      else:
        self.top_layer = conv
        self.top_size = num_out_channels
        biased = self.batch_norm(**self.batch_norm_config)
      if activation == 'relu':
        conv1 = tf.nn.relu(biased)
      elif activation == 'linear' or activation is None:
        conv1 = biased
      elif activation == 'tanh':
        conv1 = tf.nn.tanh(biased)
      else:
        raise KeyError('Invalid activation type \'%s\'' % activation)
      self.top_layer = conv1
      self.top_size = num_out_channels
      return conv1

  def _pool(self,
            pool_name,
            pool_function,
            k_height,
            k_width,
            d_height,
            d_width,
            mode,
            input_layer,
            num_channels_in):
    """Construct a pooling layer."""
    if input_layer is None:
      input_layer = self.top_layer
    else:
      self.top_size = num_channels_in
    name = pool_name + str(self.counts[pool_name])
    self.counts[pool_name] += 1
    if self.use_tf_layers:
      pool = pool_function(
          input_layer, [k_height, k_width], [d_height, d_width],
          padding=mode,
          data_format=self.channel_pos,
          name=name)
    else:
      if self.data_format == 'NHWC':
        ksize = [1, k_height, k_width, 1]
        strides = [1, d_height, d_width, 1]
      else:
        ksize = [1, 1, k_height, k_width]
        strides = [1, 1, d_height, d_width]
      pool = tf.nn.max_pool(input_layer, ksize, strides, padding=mode,
                            data_format=self.data_format, name=name)
    self.top_layer = pool
    return pool

  def mpool(self,
            k_height,
            k_width,
            d_height=2,
            d_width=2,
            mode='VALID',
            input_layer=None,
            num_channels_in=None):
    """Construct a max pooling layer."""
    return self._pool('mpool', pooling_layers.max_pooling2d, k_height, k_width,
                      d_height, d_width, mode, input_layer, num_channels_in)

  def apool(self,
            k_height,
            k_width,
            d_height=2,
            d_width=2,
            mode='VALID',
            input_layer=None,
            num_channels_in=None):
    """Construct an average pooling layer."""
    return self._pool('apool', pooling_layers.average_pooling2d, k_height,
                      k_width, d_height, d_width, mode, input_layer,
                      num_channels_in)

  def reshape(self, shape, input_layer=None):
    if input_layer is None:
      input_layer = self.top_layer
    self.top_layer = tf.reshape(input_layer, shape)
    self.top_size = shape[-1]  # HACK This may not always work
    return self.top_layer

  def affine(self,
             num_out_channels,
             input_layer=None,
             num_channels_in=None,
             bias=0.0,
             stddev=None,
             activation='relu'):
    if input_layer is None:
      input_layer = self.top_layer
    if num_channels_in is None:
      num_channels_in = self.top_size
    name = 'affine' + str(self.counts['affine'])
    self.counts['affine'] += 1
    with tf.variable_scope(name):
      init_factor = 2. if activation == 'relu' else 1.
      stddev = stddev or np.sqrt(init_factor / num_channels_in)
      kernel = self.get_variable(
          'weights', [num_channels_in, num_out_channels],
          self.variable_dtype, self.dtype,
          initializer=tf.truncated_normal_initializer(stddev=stddev))
      biases = self.get_variable('biases', [num_out_channels],
                                 self.variable_dtype, self.dtype,
                                 initializer=tf.constant_initializer(bias))
      logits = tf.nn.xw_plus_b(input_layer, kernel, biases)
      if activation == 'relu':
        affine1 = tf.nn.relu(logits, name=name)
      elif activation == 'linear' or activation is None:
        affine1 = logits
      else:
        raise KeyError('Invalid activation type \'%s\'' % activation)
      self.top_layer = affine1
      self.top_size = num_out_channels
      return affine1

  def inception_module(self, name, cols, input_layer=None, in_size=None):
    if input_layer is None:
      input_layer = self.top_layer
    if in_size is None:
      in_size = self.top_size
    name += str(self.counts[name])
    self.counts[name] += 1
    with tf.variable_scope(name):
      col_layers = []
      col_layer_sizes = []
      for c, col in enumerate(cols):
        col_layers.append([])
        col_layer_sizes.append([])
        for l, layer in enumerate(col):
          ltype, args = layer[0], layer[1:]
          kwargs = {
              'input_layer': input_layer,
              'num_channels_in': in_size
          } if l == 0 else {}
          if ltype == 'conv':
            self.conv(*args, **kwargs)
          elif ltype == 'mpool':
            self.mpool(*args, **kwargs)
          elif ltype == 'apool':
            self.apool(*args, **kwargs)
          elif ltype == 'share':  # Share matching layer from previous column
            self.top_layer = col_layers[c - 1][l]
            self.top_size = col_layer_sizes[c - 1][l]
          else:
            raise KeyError(
                'Invalid layer type for inception module: \'%s\'' % ltype)
          col_layers[c].append(self.top_layer)
          col_layer_sizes[c].append(self.top_size)
      catdim = 3 if self.data_format == 'NHWC' else 1
      self.top_layer = tf.concat([layers[-1] for layers in col_layers], catdim)
      self.top_size = sum([sizes[-1] for sizes in col_layer_sizes])
      return self.top_layer

  def spatial_mean(self, keep_dims=False):
    name = 'spatial_mean' + str(self.counts['spatial_mean'])
    self.counts['spatial_mean'] += 1
    axes = [1, 2] if self.data_format == 'NHWC' else [2, 3]
    self.top_layer = tf.reduce_mean(
        self.top_layer, axes, keep_dims=keep_dims, name=name)
    return self.top_layer

  def dropout(self, keep_prob=0.5, input_layer=None):
    if input_layer is None:
      input_layer = self.top_layer
    else:
      self.top_size = None
    name = 'dropout' + str(self.counts['dropout'])
    with tf.variable_scope(name):
      if not self.phase_train:
        keep_prob = 1.0
      if self.use_tf_layers:
        dropout = core_layers.dropout(input_layer, 1. - keep_prob)
      else:
        dropout = tf.nn.dropout(input_layer, keep_prob)
      self.top_layer = dropout
      return dropout

  def _batch_norm_without_layers(self, input_layer, decay, use_scale, epsilon):
    """Batch normalization on `input_layer` without tf.layers."""
    # We make this function as similar as possible to the
    # tf.contrib.layers.batch_norm, to minimize the differences between using
    # layers and not using layers.
    shape = input_layer.shape
    num_channels = shape[3] if self.data_format == 'NHWC' else shape[1]
    beta = self.get_variable('beta', [num_channels], tf.float32, tf.float32,
                             initializer=tf.zeros_initializer())
    if use_scale:
      gamma = self.get_variable('gamma', [num_channels], tf.float32,
                                tf.float32, initializer=tf.ones_initializer())
    else:
      gamma = tf.constant(1.0, tf.float32, [num_channels])
    # For moving variables, we use tf.get_variable instead of self.get_variable,
    # since self.get_variable returns the result of tf.cast which we cannot
    # assign to.
    moving_mean = tf.get_variable('moving_mean', [num_channels],
                                  tf.float32,
                                  initializer=tf.zeros_initializer(),
                                  trainable=False)
    moving_variance = tf.get_variable('moving_variance', [num_channels],
                                      tf.float32,
                                      initializer=tf.ones_initializer(),
                                      trainable=False)
    if self.phase_train:
      bn, batch_mean, batch_variance = tf.nn.fused_batch_norm(
          input_layer, gamma, beta, epsilon=epsilon,
          data_format=self.data_format, is_training=True)
      mean_update = moving_averages.assign_moving_average(
          moving_mean, batch_mean, decay=decay, zero_debias=False)
      variance_update = moving_averages.assign_moving_average(
          moving_variance, batch_variance, decay=decay, zero_debias=False)
      tf.add_to_collection(tf.GraphKeys.UPDATE_OPS, mean_update)
      tf.add_to_collection(tf.GraphKeys.UPDATE_OPS, variance_update)
    else:
      bn, _, _ = tf.nn.fused_batch_norm(
          input_layer, gamma, beta, mean=moving_mean,
          variance=moving_variance, epsilon=epsilon,
          data_format=self.data_format, is_training=False)
    return bn

  def batch_norm(self, input_layer=None, decay=0.999, scale=False,
                 epsilon=0.001):
    """Adds a Batch Normalization layer."""
    if input_layer is None:
      input_layer = self.top_layer
    else:
      self.top_size = None
    name = 'batchnorm' + str(self.counts['batchnorm'])
    self.counts['batchnorm'] += 1

    with tf.variable_scope(name) as scope:
      using_fp16 = (self.dtype == tf.float16)
      if using_fp16:
        # Currently fused batch norm does not support fp16, so we do a cast
        # to fp32 here.
        input_layer = tf.cast(input_layer, tf.float32)
      if self.use_tf_layers:
        bn = tf.contrib.layers.batch_norm(
            input_layer,
            decay=decay,
            scale=scale,
            epsilon=epsilon,
            is_training=self.phase_train,
            fused=True,
            data_format=self.data_format,
            scope=scope)
      else:
        bn = self._batch_norm_without_layers(input_layer, decay, scale, epsilon)
      if using_fp16:
        bn = tf.cast(bn, tf.float16)
    self.top_layer = bn
    self.top_size = bn.shape[3] if self.data_format == 'NHWC' else bn.shape[1]
    self.top_size = int(self.top_size)
    return bn

  def lrn(self, depth_radius, bias, alpha, beta):
    """Adds a local response normalization layer."""
    name = 'lrn' + str(self.counts['lrn'])
    self.counts['lrn'] += 1
    self.top_layer = tf.nn.lrn(
        self.top_layer, depth_radius, bias, alpha, beta, name=name)
    return self.top_layer