From 9a73d3baae2f2d93d37c77ca43668910a63141d0 Mon Sep 17 00:00:00 2001
From: cb-Hades <81743695+cb-Hades@users.noreply.github.com>
Date: Tue, 16 Apr 2024 08:51:31 +0200
Subject: [PATCH] Fixed an error with variable names

---
 src/refinegems/cmd_access.py | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/refinegems/cmd_access.py b/src/refinegems/cmd_access.py
index c341c7e5..45cd3372 100644
--- a/src/refinegems/cmd_access.py
+++ b/src/refinegems/cmd_access.py
@@ -113,7 +113,7 @@ def gaps():
 
 # Find gaps via genes
 # -------------------
-@gapfill.command()
+@gaps.command()
 @click.argument('model', type=str)
 def find(model,gff_file,organismid,gapfill_params,filename):
 	"""Find gaps in a model based on the genes/gene products of the underlying organism
@@ -122,7 +122,7 @@ def find(model,gff_file,organismid,gapfill_params,filename):
 
 # Fill gaps via file
 # ------------------
-@gapfill.command()
+@gaps.command()
 @click.argument('model', type=str)
 def fill(model,gap_analysis_result):
 	"""Fill gaps in a model based on a user-provided input file
@@ -131,7 +131,7 @@ def fill(model,gap_analysis_result):
 
 # Find and fill gaps via genes
 # ----------------------------
-@gapfill.command()
+@gaps.command()
 @click.argument('model', type=str)
 def complete(model,gapfill_params,filename):
 	"""Find and fill gaps based on the genes/gene products automatically