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Neighbor annotations with indels #16

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ezorita opened this issue Sep 12, 2017 · 0 comments
Open

Neighbor annotations with indels #16

ezorita opened this issue Sep 12, 2017 · 0 comments
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ezorita commented Sep 12, 2017 •
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Current annotation only counts substitutions. However, even if we use Illumina, we may find many indels (SNP for instance).

Update annotation algorithm to search also for indels, this may be very challenging because it will make it much slower to compute.
@ezorita ezorita self-assigned this Sep 12, 2017
@ezorita ezorita added this to the Neighbors milestone Sep 12, 2017
@ezorita ezorita changed the title Add INDEL to k-mer annotation Neighbor annotations with indels. May 17, 2018
@ezorita ezorita removed this from the Neighbors milestone May 17, 2018
@ezorita ezorita changed the title Neighbor annotations with indels. Neighbor annotations with indels May 17, 2018
@ezorita ezorita mentioned this issue May 17, 2018
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