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Neighbor discovery algorihtm #45

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4 tasks

ezorita opened this issue May 18, 2018 · 0 comments

Owner

ezorita commented May 18, 2018

Description

Use neighbor information on best alignment to find references to similar sequences and discover other unknown candidates.

Subtasks

Check neighbor information on best alignment(s).
Use alignment info to generate seeds to similar loci.
Filter out seeds to positions that have been already explored.

Acceptance criteria

Masked seeds should be discovered if alignment info is available on neighbor annotation.

Test procedures

This is a difficult test...

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