Use Transonic 0.6.0 + better Github Actions Linux

.github/workflows/ci-linux.yml

@@ -30,9 +30,12 @@ jobs:
       run: |
         cp .github/workflows/.fluidfft-site.cfg $HOME
         nox -s test_without_fft_and_pythran
+        mv .coverage/coverage.xml coverage_without_fft_and_pythran.xml
         nox -s test_with_fft_and_pythran
+        mv .coverage/coverage.xml coverage_with_fft_and_pythran.xml
     - uses: codecov/codecov-action@v3
       with:
         token: ${{ secrets.CODECOV_TOKEN }}
-        fail_ci_if_error: true # optional (default = false)
+        fail_ci_if_error: false # optional (default = false)
         verbose: true # optional (default = false)
+        files: coverage_without_fft_and_pythran.xml,coverage_with_fft_and_pythran.xml

noxfile.py

@@ -1,4 +1,6 @@
 import os
+from pathlib import Path
+from shutil import rmtree
 
 import nox
 
@@ -14,19 +16,29 @@ def validate_code(session):
     session.run("pdm", "validate_code", external=True)
 
 
+def _test(session, env=None):
+    path_coverage = Path(".coverage")
+    rmtree(path_coverage, ignore_errors=True)
+    path_coverage.mkdir(exist_ok=True)
+
+    if env is not None:
+        print(env)
+
+    session.run("make", "_tests_coverage", external=True, env=env)
+    session.run("coverage", "combine")
+    session.run("coverage", "report")
+    session.run("coverage", "xml")
+
+
 @nox.session
 def test_without_fft_and_pythran(session):
     command = "pdm sync --clean -G dev -G test -G mpi --no-self"
     session.run_always(*command.split(), external=True)
     session.install(
         ".", "--config-settings=setup-args=-Dtransonic-backend=python", "--no-deps"
     )
-    session.run(
-        "make",
-        "_tests_coverage",
-        external=True,
-        env={"TRANSONIC_BACKEND": "python", "TRANSONIC_NO_REPLACE": "1"},
-    )
+
+    _test(session, env={"TRANSONIC_BACKEND": "python", "TRANSONIC_NO_REPLACE": "1"})
 
 
 @nox.session
@@ -38,4 +50,4 @@ def test_with_fft_and_pythran(session):
     session.run_always(*command.split(), external=True)
     session.install(".", "--no-deps", "-C", "setup-args=-Dnative=true")
 
-    session.run("make", "_tests_coverage", external=True)
+    _test(session)

pixi.toml

@@ -15,7 +15,7 @@ platforms = ["linux-64"]
 [tasks]
 # use as `pixi run install-editable`
 # install-dependencies = "pixi install && pip install -e ./lib && pip install ../transonic"
-install-dependencies = "pixi install && pip install -e ./lib && pip install transonic==0.6.0rc0"
+install-dependencies = "pixi install && pip install -e ./lib && pip install 'transonic>=0.6.0'"
 install-editable = {cmd = "pip install -e . -v --no-build-isolation --no-deps", depends_on = ["install-dependencies"]}
 
 [dependencies]

pyproject.toml

@@ -3,7 +3,7 @@ requires = [
          "meson-python",
          "numpy",
          # "transonic@hg+https://foss.heptapod.net/fluiddyn/transonic",
-         "transonic>=0.6.0rc0",
+         "transonic>=0.6.0",
          "pythran>=0.9.7",
          ]
 build-backend = 'mesonpy'
@@ -24,7 +24,7 @@ dependencies = [
     "fluidsim-core>=0.7.4",
     "h5py",
     "h5netcdf",
-    "transonic>=0.6.0rc0",
+    "transonic>=0.6.0",
     "xarray",
     "rich",
     "matplotlib>=3.3",
@@ -140,7 +140,7 @@ build = [
     "meson-python",
     "numpy",
     # "transonic@hg+https://foss.heptapod.net/fluiddyn/transonic@default",
-    "transonic>=0.6.0rc0",
+    "transonic>=0.6.0",
     "pythran>=0.9.7",
     "ninja",
 ]