From 87cd1ba81a8ec96dd745e8937ae2b4a0b3cf37e6 Mon Sep 17 00:00:00 2001 From: pgaudet Date: Fri, 26 Jul 2024 14:02:24 +0200 Subject: [PATCH] Update gorules_test_errors.gaf --- docs/gorules_test_errors.gaf | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/docs/gorules_test_errors.gaf b/docs/gorules_test_errors.gaf index b0be04ca..6d67cbda 100644 --- a/docs/gorules_test_errors.gaf +++ b/docs/gorules_test_errors.gaf @@ -183,6 +183,10 @@ FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198|PMID:15457211 IMP P GO FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198 PMID:15457211 IMP P GORULE_TEST:0000027-16 Crk oncogene CED-2|CG1587|CRK|D-CRK|D-Crk|DCrk|Dcrk|crk|dCRK|dCrk protein taxon:7227 20180912 GO_Central ! FAILS GORULE:0000027 - TEST 17 - bad PMID ID syntax FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198|PMID:1545721X IMP P GORULE_TEST:0000027-17 Crk oncogene CED-2|CG1587|CRK|D-CRK|D-Crk|DCrk|Dcrk|crk|dCRK|dCrk protein taxon:7227 20180912 GO_Central +! SHOULD PASS GORULE:0000027 - TEST 18 - 'Assigned by' is in groups.yaml (but not in dbxref.yaml) +UniProtKB Q6UW15 REG3G involved_in GO:0006401 PMID:16931762 IDA P GORULE_TEST:0000027-18 Regenerating islet-derived protein 3-gamma REG3G|PAP1B|UNQ429/PRO162 protein taxon:9606 20220606 LBL +! FAILS GORULE:0000027 - TEST 19 - 'Assigned by' is in dbxref.yaml but not in groups.yaml +UniProtKB Q6UW15 REG3G involved_in GO:0006401 PMID:16931762 IDA P GORULE_TEST:0000027-18 Regenerating islet-derived protein 3-gamma REG3G|PAP1B|UNQ429/PRO162 protein taxon:9606 20220606 PO ! FAILS GORULE:0000028 - TEST 1 - Bad GO aspect, C instead of P UniProtKB Q9HC96 CAPN10 involved_in GO:0006921 PMID:23072806 IDA C GORULE_TEST:0000028-1 Calpain-10 CAPN10,KIAA1845 protein taxon:9606 20140213 GO_Central ! FAILS GORULE:0000028 - TEST 2 - Bad GO aspect, F instead of P