gpad files have mixture of ID types in extensions

[ValWood]

Describe the issue/bug

For example the SGD GPI has sometimes UniProt ID sand sometimes SGD IDs. This makes the files difficult to use (presumably the IDs should match the DBAuthority)?

A clear and concise description of what the bug is.

happens_during(GO:0034605),has_input(GO:0070847)
happens_during(GO:0034605),has_input(SGD:S000004798)
happens_during(GO:0034605),has_input(SGD:S000004812)
happens_during(GO:0034605),has_input(UniProtKB:P04050)
happens_during(GO:0034605),has_input(UniProtKB:P06115)
happens_during(GO:0034605),has_input(UniProtKB:P32835)
happens_during(GO:0034605),has_input(UniProtKB:P54114)
happens_during(GO:0034605),has_input(UniProtKB:Q01589)
happens_during(GO:0034605),has_input(UniProtKB:Q12412)
happens_during(GO:0034605),occurs_in(GO:0005829)
happens_during(GO:0036295),has_input(SGD:S000000765)
happens_during(GO:0036295),has_input(SGD:S000001084)
happens_during(GO:0036295),has_input(SGD:S000001373)
happens_during(GO:0036295),has_input(SGD:S000003808)
happens_during(GO:0036295),has_input(SGD:S000004024)
happens_during(GO:0036295),has_input(SGD:S000004938)
happens_during(GO:0036295),has_input(SGD:S000005904)
happens_during(GO:0036295),has_input(SGD:S000006269)

Expected behavior

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To Reproduce

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[suzialeksander]

Hi @ValWood, I've added this request to the specs for the GPAD 2.0, as it doesn't seem to be an issue for the current specs. If this is affecting a particular pipeline or process, please add that to the specs ticket.

I'll pass the request along to SGD too, although with the current squeeze I'm not sure when/if this can be addressed at SGD.

[ValWood]

Maybe this is more of an SGD issue than a GO issue, but even for GO users it's really confusing to have a combination of IDs for a species.

I can't remember which gene the example above was but here is another one (PEX1)

It's really difficult for a user to know if the extensions refer to the same or different entities.