diff --git a/denv_pipeline/DENV_primers_and_refs/DENV2_sylvatic.bed b/denv_pipeline/DENV_primers_and_refs/DENV2_sylvatic.bed
index eeb567c..3bef2d4 100644
--- a/denv_pipeline/DENV_primers_and_refs/DENV2_sylvatic.bed
+++ b/denv_pipeline/DENV_primers_and_refs/DENV2_sylvatic.bed
@@ -1,74 +1,74 @@
-NC_001474.2	13	33	DENV2_1_LEFT2	1	+
-NC_001474.2	459	481	DENV2_1_RIGHT	1	-
-NC_001474.2	368	391	DENV2_2_LEFT	2	+
-NC_001474.2	753	777	DENV2_2_RIGHT	2	-
-NC_001474.2	648	671	DENV2_3_LEFT	1	+
-NC_001474.2	1026	1046	DENV2_3_RIGHT	1	-
-NC_001474.2	919	941	DENV2_4_LEFT	2	+
-NC_001474.2	1291	1316	DENV2_4_RIGHT	2	-
-NC_001474.2	1192	1214	DENV2_5_LEFT	1	+
-NC_001474.2	1567	1589	DENV2_5_RIGHT	1	-
-NC_001474.2	1503	1525	DENV2_6_LEFT	2	+
-NC_001474.2	1873	1898	DENV2_6_RIGHT	2	-
-NC_001474.2	1757	1779	DENV2_7_LEFT	1	+
-NC_001474.2	2128	2150	DENV2_7_RIGHT	1	-
-NC_001474.2	2036	2058	DENV2_8_LEFT	2	+
-NC_001474.2	2421	2443	DENV2_8_RIGHT	2	-
-NC_001474.2	2324	2348	DENV2_9_LEFT	1	+
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-NC_001474.2	2620	2647	DENV2_10_LEFT	2	+
-NC_001474.2	2998	3020	DENV2_10_RIGHT	2	-
-NC_001474.2	2850	2872	DENV2_11_LEFT	1	+
-NC_001474.2	3228	3250	DENV2_11_RIGHT	1	-
-NC_001474.2	3165	3185	DENV2_12_LEFT	2	+
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-NC_001474.2	3387	3409	DENV2_13_LEFT	1	+
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-NC_001474.2	3696	3718	DENV2_14_LEFT	2	+
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-NC_001474.2	4500	4522	DENV2_16_RIGHT	2	-
-NC_001474.2	4467	4489	DENV2_17_LEFT	1	+
-NC_001474.2	4839	4859	DENV2_17_RIGHT	1	-
-NC_001474.2	4768	4792	DENV2_18_LEFT	2	+
-NC_001474.2	5136	5158	DENV2_18_RIGHT	2	-
-NC_001474.2	5007	5030	DENV2_19_LEFT	1	+
-NC_001474.2	5402	5426	DENV2_19_RIGHT	1	-
-NC_001474.2	5316	5337	DENV2_20_LEFT	2	+
-NC_001474.2	5713	5736	DENV2_20_RIGHT	2	-
-NC_001474.2	5568	5590	DENV2_21_LEFT	1	+
-NC_001474.2	5956	5980	DENV2_21_RIGHT	1	-
-NC_001474.2	5882	5906	DENV2_22_LEFT	2	+
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-NC_001474.2	6735	6758	DENV2_24_RIGHT	2	-
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-NC_001474.2	7033	7055	DENV2_25_RIGHT	1	-
-NC_001474.2	6914	6935	DENV2_26_LEFT	2	+
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-NC_001474.2	7240	7262	DENV2_27_LEFT	1	+
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-NC_001474.2	7516	7538	DENV2_28_LEFT	2	+
-NC_001474.2	7902	7924	DENV2_28_RIGHT	2	-
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-NC_001474.2	8092	8117	DENV2_30_LEFT	2	+
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-NC_001474.2	8424	8447	DENV2_31_LEFT	1	+
-NC_001474.2	8797	8821	DENV2_31_RIGHT	1	-
-NC_001474.2	8655	8676	DENV2_32_LEFT	2	+
-NC_001474.2	9026	9050	DENV2_32_RIGHT	2	-
-NC_001474.2	8967	8987	DENV2_33_LEFT	1	+
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-NC_001474.2	9606	9630	DENV2_34_RIGHT	2	-
-NC_001474.2	9532	9554	DENV2_35_LEFT	1	+
-NC_001474.2	9928	9950	DENV2_35_RIGHT	1	-
-NC_001474.2	9862	9884	DENV2_36_LEFT	2	+
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-NC_001474.2	10176	10201	DENV2_37_LEFT	1	+
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