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.travis.yml
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.travis.yml
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# Taken and modified from
# https://github.com/biocore/scikit-bio/blob/master/.travis.yml
dist: bionic
language: python
services:
- xvfb
env:
- PYTHON_VERSION=3.5
before_install:
- wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
- chmod +x miniconda.sh
- ./miniconda.sh -b
- export PATH=/home/travis/miniconda3/bin:$PATH
install:
- conda env create -n iab -f environment.yml
- source activate iab
- conda install -y nose
- pip install https://github.com/caporaso-lab/build-iab/archive/master.zip
- biab notebook -i book -o ipynb
script:
- nosetests --with-doctest
- cd ipynb
- jupyter nbconvert *ipynb */*ipynb --execute --ExecutePreprocessor.timeout=-1