From 9da93a6c3f14ad4feee5f058524bba8bfc980aed Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 29 Apr 2024 08:04:45 +0000 Subject: [PATCH] update dependencies for ubuntu-latest/py3.9 --- requirements/ubuntu-latest_py3.9.txt | 265 +++++------ requirements/ubuntu-latest_py3.9_extras.txt | 474 ++++++++++---------- 2 files changed, 375 insertions(+), 364 deletions(-) diff --git a/requirements/ubuntu-latest_py3.9.txt b/requirements/ubuntu-latest_py3.9.txt index f9f9ce36..fc770ee1 100644 --- a/requirements/ubuntu-latest_py3.9.txt +++ b/requirements/ubuntu-latest_py3.9.txt @@ -8,15 +8,12 @@ aiofiles==22.1.0 # via ypy-websocket aioitertools==0.11.0 # via maggma -aiosqlite==0.19.0 +aiosqlite==0.20.0 # via ypy-websocket annotated-types==0.6.0 # via pydantic -ansi2html==1.8.0 - # via dash -anyio==3.7.1 +anyio==4.3.0 # via - # fastapi # jupyter-server # starlette argon2-cffi==23.1.0 @@ -30,29 +27,29 @@ arrow==1.3.0 # via isoduration asttokens==2.4.1 # via stack-data -attrs==23.1.0 +attrs==23.2.0 # via # jsonschema # referencing -babel==2.13.1 +babel==2.14.0 # via jupyterlab-server -bcrypt==4.0.1 +bcrypt==4.1.2 # via paramiko -beautifulsoup4==4.12.2 +beautifulsoup4==4.12.3 # via nbconvert bleach==6.1.0 # via nbconvert -blinker==1.7.0 +blinker==1.8.1 # via flask -boto3==1.28.77 +boto3==1.34.93 # via maggma -botocore==1.31.77 +botocore==1.34.93 # via # boto3 # s3transfer cachelib==0.9.0 # via flask-caching -certifi==2023.7.22 +certifi==2024.2.2 # via requests cffi==1.16.0 # via @@ -66,88 +63,90 @@ click==8.1.7 # flask # mongogrant # uvicorn -comm==0.1.4 +comm==0.2.2 # via ipykernel -contourpy==1.2.0 +contourpy==1.2.1 # via matplotlib -cryptography==41.0.5 +cryptography==42.0.5 # via paramiko crystaltoolkit-extension==0.6.0 - # via crystal-toolkit (pyproject.toml) + # via crystal_toolkit (pyproject.toml) cycler==0.12.1 # via matplotlib -dash==2.14.1 - # via crystal-toolkit (pyproject.toml) +dash==2.16.1 + # via crystal_toolkit (pyproject.toml) dash-core-components==2.0.0 # via dash dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.39 - # via crystal-toolkit (pyproject.toml) +dash-mp-components==0.4.45 + # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash -debugpy==1.8.0 +debugpy==1.8.1 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert -dnspython==2.4.2 +dnspython==2.6.1 # via # maggma # pymongo -emmet-core==0.72.7 +emmet-core==0.82.2 # via mp-api entrypoints==0.4 # via jupyter-client -exceptiongroup==1.1.3 +exceptiongroup==1.2.1 # via # anyio # ipython executing==2.0.1 # via stack-data -fastapi==0.104.1 +fastapi==0.110.2 # via maggma -fastjsonschema==2.18.1 +fastjsonschema==2.19.1 # via nbformat -flask==3.0.0 +flask==3.0.3 # via # dash # flask-caching # mongogrant -flask-caching==2.1.0 - # via crystal-toolkit (pyproject.toml) -fonttools==4.44.0 +flask-caching==2.2.0 + # via crystal_toolkit (pyproject.toml) +fonttools==4.51.0 # via matplotlib fqdn==1.5.1 # via jsonschema -frozendict==2.3.8 - # via crystal-toolkit (pyproject.toml) -future==0.18.3 +frozendict==2.4.2 + # via crystal_toolkit (pyproject.toml) +future==1.0.0 # via uncertainties h11==0.14.0 # via uvicorn -idna==3.4 +idna==3.7 # via # anyio # jsonschema # requests -imageio==2.31.6 +imageio==2.34.1 # via scikit-image -importlib-metadata==6.8.0 +importlib-metadata==7.1.0 # via # dash # flask # jupyter-ydoc # jupyterlab-server # nbconvert -importlib-resources==6.1.0 - # via matplotlib -ipykernel==6.26.0 +importlib-resources==6.4.0 + # via + # matplotlib + # spglib +ipykernel==6.29.4 # via # nbclassic # notebook -ipython==8.17.2 +ipython==8.18.1 # via # ipykernel # jupyterlab @@ -157,11 +156,11 @@ ipython-genutils==0.2.0 # notebook isoduration==20.11.0 # via jsonschema -itsdangerous==2.1.2 +itsdangerous==2.2.0 # via flask jedi==0.19.1 # via ipython -jinja2==3.1.2 +jinja2==3.1.3 # via # flask # jupyter-server @@ -174,21 +173,21 @@ jmespath==1.0.1 # via # boto3 # botocore -joblib==1.3.2 +joblib==1.4.0 # via # pymatgen # scikit-learn -json5==0.9.14 +json5==0.9.25 # via jupyterlab-server jsonpointer==2.4 # via jsonschema -jsonschema[format-nongpl]==4.19.2 +jsonschema[format-nongpl]==4.21.1 # via # jupyter-events # jupyterlab-server # maggma # nbformat -jsonschema-specifications==2023.7.1 +jsonschema-specifications==2023.12.1 # via jsonschema jupyter-client==7.4.9 # via @@ -197,7 +196,7 @@ jupyter-client==7.4.9 # nbclassic # nbclient # notebook -jupyter-core==5.5.0 +jupyter-core==5.7.2 # via # ipykernel # jupyter-client @@ -208,20 +207,20 @@ jupyter-core==5.5.0 # nbconvert # nbformat # notebook -jupyter-events==0.8.0 +jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.9.1 +jupyter-server==2.14.0 # via # jupyter-server-fileid # jupyterlab # jupyterlab-server # nbclassic # notebook-shim -jupyter-server-fileid==0.9.0 +jupyter-server-fileid==0.9.2 # via jupyter-server-ydoc -jupyter-server-terminals==0.4.4 +jupyter-server-terminals==0.5.3 # via jupyter-server jupyter-server-ydoc==0.8.0 # via jupyterlab @@ -229,28 +228,28 @@ jupyter-ydoc==0.2.5 # via # jupyter-server-ydoc # jupyterlab -jupyterlab==3.6.6 +jupyterlab==3.6.7 # via crystaltoolkit-extension -jupyterlab-pygments==0.2.2 +jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.25.0 +jupyterlab-server==2.27.1 # via jupyterlab kiwisolver==1.4.5 # via matplotlib -latexcodec==2.0.1 +latexcodec==3.0.0 # via pybtex -lazy-loader==0.3 +lazy-loader==0.4 # via scikit-image -maggma==0.57.4 +maggma==0.65.0 # via mp-api -markupsafe==2.1.3 +markupsafe==2.1.5 # via # jinja2 # nbconvert # werkzeug -matplotlib==3.8.1 +matplotlib==3.8.4 # via pymatgen -matplotlib-inline==0.1.6 +matplotlib-inline==0.1.7 # via # ipykernel # ipython @@ -260,17 +259,17 @@ mongogrant==0.3.3 # via maggma mongomock==4.1.2 # via maggma -monty==2023.11.3 +monty==2024.4.17 # via # emmet-core # maggma # mp-api # pymatgen -mp-api==0.37.5 - # via crystal-toolkit (pyproject.toml) +mp-api==0.41.2 + # via crystal_toolkit (pyproject.toml) mpmath==1.3.0 # via sympy -msgpack==1.0.7 +msgpack==1.0.8 # via # maggma # mp-api @@ -278,21 +277,21 @@ nbclassic==1.0.0 # via # jupyterlab # notebook -nbclient==0.8.0 +nbclient==0.10.0 # via nbconvert -nbconvert==7.10.0 +nbconvert==7.16.3 # via # jupyter-server # nbclassic # notebook -nbformat==5.9.2 +nbformat==5.10.4 # via # jupyter-server # nbclassic # nbclient # nbconvert # notebook -nest-asyncio==1.5.8 +nest-asyncio==1.6.0 # via # dash # ipykernel @@ -305,9 +304,9 @@ networkx==3.2.1 # scikit-image notebook==6.5.6 # via jupyterlab -notebook-shim==0.2.3 +notebook-shim==0.2.4 # via nbclassic -numpy==1.26.1 +numpy==1.26.4 # via # contourpy # imageio @@ -321,16 +320,17 @@ numpy==1.26.1 # shapely # spglib # tifffile -orjson==3.9.10 +orjson==3.10.1 # via maggma -overrides==7.4.0 +overrides==7.7.0 # via jupyter-server -packaging==23.2 +packaging==24.0 # via # ipykernel # jupyter-server # jupyterlab # jupyterlab-server + # lazy-loader # matplotlib # mongomock # nbconvert @@ -338,35 +338,35 @@ packaging==23.2 # scikit-image palettable==3.3.3 # via pymatgen -pandas==2.1.2 +pandas==2.2.2 # via pymatgen -pandocfilters==1.5.0 +pandocfilters==1.5.1 # via nbconvert -paramiko==3.3.1 +paramiko==3.4.0 # via sshtunnel -parso==0.8.3 +parso==0.8.4 # via jedi -pexpect==4.8.0 +pexpect==4.9.0 # via ipython -pillow==10.0.1 +pillow==10.3.0 # via # imageio # matplotlib # scikit-image -platformdirs==3.11.0 +platformdirs==4.2.1 # via jupyter-core -plotly==5.18.0 +plotly==5.21.0 # via # dash # pymatgen -prometheus-client==0.18.0 +prometheus-client==0.20.0 # via # jupyter-server # nbclassic # notebook -prompt-toolkit==3.0.39 +prompt-toolkit==3.0.43 # via ipython -psutil==5.9.6 +psutil==5.9.8 # via ipykernel ptyprocess==0.7.0 # via @@ -378,41 +378,41 @@ pybtex==0.24.0 # via # emmet-core # pymatgen -pycparser==2.21 +pycparser==2.22 # via cffi -pydantic==2.4.2 +pydantic==2.7.1 # via # emmet-core # fastapi # maggma # pydantic-settings -pydantic-core==2.10.1 +pydantic-core==2.18.2 # via pydantic -pydantic-settings==2.0.3 +pydantic-settings==2.2.1 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # emmet-core # maggma -pydash==7.0.6 +pydash==8.0.1 # via maggma -pygments==2.16.1 +pygments==2.17.2 # via # ipython # nbconvert -pymatgen==2023.10.11 +pymatgen==2024.4.13 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # emmet-core # mp-api -pymongo==4.6.0 +pymongo==4.7.0 # via # maggma # mongogrant pynacl==1.5.0 # via paramiko -pyparsing==3.1.1 +pyparsing==3.1.2 # via matplotlib -python-dateutil==2.8.2 +python-dateutil==2.9.0.post0 # via # arrow # botocore @@ -420,11 +420,11 @@ python-dateutil==2.8.2 # maggma # matplotlib # pandas -python-dotenv==1.0.0 +python-dotenv==1.0.1 # via pydantic-settings python-json-logger==2.0.7 # via jupyter-events -pytz==2023.3.post1 +pytz==2024.1 # via pandas pyyaml==6.0.1 # via @@ -438,7 +438,7 @@ pyzmq==24.0.1 # maggma # nbclassic # notebook -referencing==0.30.2 +referencing==0.35.0 # via # jsonschema # jsonschema-specifications @@ -460,56 +460,57 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rpds-py==0.10.6 +rpds-py==0.18.0 # via # jsonschema # referencing -ruamel-yaml==0.17.40 +ruamel-yaml==0.18.6 # via # maggma # pymatgen ruamel-yaml-clib==0.2.8 # via ruamel-yaml -s3transfer==0.7.0 +s3transfer==0.10.1 # via boto3 scikit-image==0.22.0 - # via crystal-toolkit (pyproject.toml) -scikit-learn==1.3.2 - # via crystal-toolkit (pyproject.toml) -scipy==1.11.3 + # via crystal_toolkit (pyproject.toml) +scikit-learn==1.4.2 + # via crystal_toolkit (pyproject.toml) +scipy==1.13.0 # via # pymatgen # scikit-image # scikit-learn -send2trash==1.8.2 +send2trash==1.8.3 # via # jupyter-server # nbclassic # notebook sentinels==1.0.0 # via mongomock -shapely==2.0.2 - # via crystal-toolkit (pyproject.toml) +shapely==2.0.4 + # via crystal_toolkit (pyproject.toml) six==1.16.0 # via # asttokens # bleach - # latexcodec # pybtex # python-dateutil # retrying # rfc3339-validator -sniffio==1.3.0 +smart-open==7.0.4 + # via mp-api +sniffio==1.3.1 # via anyio soupsieve==2.5 # via beautifulsoup4 -spglib==2.1.0 +spglib==2.4.0 # via pymatgen sshtunnel==0.4.0 # via maggma stack-data==0.6.3 # via ipython -starlette==0.27.0 +starlette==0.37.2 # via fastapi sympy==1.12 # via pymatgen @@ -517,21 +518,21 @@ tabulate==0.9.0 # via pymatgen tenacity==8.2.3 # via plotly -terminado==0.17.1 +terminado==0.18.1 # via # jupyter-server # jupyter-server-terminals # nbclassic # notebook -threadpoolctl==3.2.0 +threadpoolctl==3.4.0 # via scikit-learn -tifffile==2023.9.26 +tifffile==2024.4.24 # via scikit-image -tinycss2==1.2.1 +tinycss2==1.3.0 # via nbconvert tomli==2.0.1 # via jupyterlab -tornado==6.3.3 +tornado==6.4 # via # ipykernel # jupyter-client @@ -540,11 +541,11 @@ tornado==6.3.3 # nbclassic # notebook # terminado -tqdm==4.66.1 +tqdm==4.66.2 # via # maggma # pymatgen -traitlets==5.13.0 +traitlets==5.14.3 # via # comm # ipykernel @@ -559,11 +560,13 @@ traitlets==5.13.0 # nbconvert # nbformat # notebook -types-python-dateutil==2.8.19.14 +types-python-dateutil==2.9.0.20240316 # via arrow -typing-extensions==4.8.0 +typing-extensions==4.11.0 # via # aioitertools + # aiosqlite + # anyio # dash # emmet-core # fastapi @@ -574,7 +577,7 @@ typing-extensions==4.8.0 # pydash # starlette # uvicorn -tzdata==2023.3 +tzdata==2024.1 # via pandas uncertainties==3.1.7 # via pymatgen @@ -584,31 +587,33 @@ urllib3==1.26.18 # via # botocore # requests -uvicorn==0.23.2 +uvicorn==0.29.0 # via maggma -wcwidth==0.2.9 +wcwidth==0.2.13 # via prompt-toolkit webcolors==1.13 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # jsonschema webencodings==0.5.1 # via # bleach # tinycss2 -websocket-client==1.6.4 +websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.1 +werkzeug==3.0.2 # via # dash # flask +wrapt==1.16.0 + # via smart-open y-py==0.6.2 # via # jupyter-ydoc # ypy-websocket ypy-websocket==0.8.4 # via jupyter-server-ydoc -zipp==3.17.0 +zipp==3.18.1 # via # importlib-metadata # importlib-resources diff --git a/requirements/ubuntu-latest_py3.9_extras.txt b/requirements/ubuntu-latest_py3.9_extras.txt index 6f310af1..590751fa 100644 --- a/requirements/ubuntu-latest_py3.9_extras.txt +++ b/requirements/ubuntu-latest_py3.9_extras.txt @@ -6,23 +6,20 @@ # aiofiles==22.1.0 # via ypy-websocket -aiohttp==3.8.6 +aiohttp==3.9.5 # via dephell aioitertools==0.11.0 # via maggma aiosignal==1.3.1 # via aiohttp -aiosqlite==0.19.0 +aiosqlite==0.20.0 # via ypy-websocket -alabaster==0.7.13 +alabaster==0.7.16 # via sphinx annotated-types==0.6.0 # via pydantic -ansi2html==1.8.0 - # via dash -anyio==3.7.1 +anyio==4.3.0 # via - # fastapi # jupyter-server # starlette argon2-cffi==23.1.0 @@ -45,7 +42,7 @@ async-timeout==4.0.3 # via # aiohttp # redis -attrs==23.1.0 +attrs==23.2.0 # via # aiohttp # dephell @@ -61,28 +58,28 @@ attrs==23.1.0 # outcome # referencing # trio -babel==2.13.1 +babel==2.14.0 # via # jupyterlab-server # sphinx -bcrypt==4.0.1 +bcrypt==4.1.2 # via paramiko -beautifulsoup4==4.12.2 +beautifulsoup4==4.12.3 # via # dash # gdown # nbconvert -black==23.10.1 - # via crystal-toolkit (pyproject.toml) +black==24.4.2 + # via crystal_toolkit (pyproject.toml) bleach==6.1.0 # via nbconvert -blinker==1.7.0 +blinker==1.8.1 # via flask -boltztrap2==22.12.1 +boltztrap2==24.1.1 # via ifermi -boto3==1.28.77 +boto3==1.34.93 # via maggma -botocore==1.31.77 +botocore==1.34.93 # via # boto3 # s3transfer @@ -90,7 +87,7 @@ cachelib==0.9.0 # via flask-caching cerberus==1.3.5 # via dephell -certifi==2023.7.22 +certifi==2024.2.2 # via # dephell # netcdf4 @@ -106,9 +103,7 @@ cfgv==3.4.0 cftime==1.6.3 # via netcdf4 charset-normalizer==3.3.2 - # via - # aiohttp - # requests + # via requests click==8.1.7 # via # black @@ -124,54 +119,54 @@ cloudpickle==3.0.0 # distributed colorspacious==1.1.2 # via py4dstem -comm==0.1.4 +comm==0.2.2 # via ipykernel commonmark==0.9.1 # via recommonmark -contourpy==1.2.0 +contourpy==1.2.1 # via matplotlib -cryptography==41.0.5 +cryptography==42.0.5 # via # paramiko # pyopenssl # urllib3 crystaltoolkit-extension==0.6.0 - # via crystal-toolkit (pyproject.toml) + # via crystal_toolkit (pyproject.toml) cycler==0.12.1 # via matplotlib -dash[testing]==2.14.1 +dash[testing]==2.16.1 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # dash-extensions # dash-vtk dash-core-components==2.0.0 # via dash -dash-extensions==1.0.4 - # via crystal-toolkit (pyproject.toml) +dash-extensions==1.0.14 + # via crystal_toolkit (pyproject.toml) dash-html-components==2.0.0 # via dash -dash-mp-components==0.4.39 - # via crystal-toolkit (pyproject.toml) +dash-mp-components==0.4.45 + # via crystal_toolkit (pyproject.toml) dash-table==5.0.0 # via dash dash-testing-stub==0.0.2 # via dash dash-vtk==0.0.9 - # via crystal-toolkit (pyproject.toml) -dask==2023.10.1 + # via crystal_toolkit (pyproject.toml) +dask==2024.4.2 # via # distributed # py4dstem -dataclass-wizard==0.22.2 +dataclass-wizard==0.22.3 # via dash-extensions -debugpy==1.8.0 +debugpy==1.8.1 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert dephell==0.8.3 - # via crystal-toolkit (pyproject.toml) + # via crystal_toolkit (pyproject.toml) dephell-archive==0.1.7 # via dephell dephell-argparse==0.1.3 @@ -203,37 +198,37 @@ dephell-venvs==0.1.18 # via dephell dephell-versioning==0.1.2 # via dephell -dill==0.3.7 +dill==0.3.8 # via # multiprocess # py4dstem -distlib==0.3.7 +distlib==0.3.8 # via virtualenv -distributed==2023.10.1 +distributed==2024.4.2 # via py4dstem -dnspython==2.4.2 +dnspython==2.6.1 # via # maggma # pymongo -docutils==0.18.1 +docutils==0.20.1 # via # m2r # recommonmark # sphinx # sphinx-rtd-theme dscribe==2.1.0 - # via crystal-toolkit (pyproject.toml) -editorconfig==0.12.3 + # via crystal_toolkit (pyproject.toml) +editorconfig==0.12.4 # via jsbeautifier emdfile==0.0.14 # via py4dstem -emmet-core==0.72.7 +emmet-core==0.82.2 # via mp-api entrypoints==0.4 # via # jupyter-client # nbconvert -exceptiongroup==1.1.3 +exceptiongroup==1.2.1 # via # anyio # ipython @@ -242,69 +237,67 @@ exceptiongroup==1.1.3 # trio-websocket executing==2.0.1 # via stack-data -fastapi==0.104.1 +fastapi==0.110.2 # via maggma -fastjsonschema==2.18.1 +fastjsonschema==2.19.1 # via nbformat -filelock==3.13.1 +filelock==3.13.4 # via # gdown # virtualenv -flask==2.3.3 +flask==3.0.3 # via # dash # flask-caching # mongogrant -flask-caching==2.0.2 +flask-caching==2.2.0 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # dash-extensions -fonttools==4.44.0 +fonttools==4.51.0 # via matplotlib fqdn==1.5.1 # via jsonschema -frozendict==2.3.8 - # via crystal-toolkit (pyproject.toml) -frozenlist==1.4.0 +frozendict==2.4.2 + # via crystal_toolkit (pyproject.toml) +frozenlist==1.4.1 # via # aiohttp # aiosignal -fsspec==2023.10.0 +fsspec==2024.3.1 # via dask -future==0.18.3 - # via - # matminer - # uncertainties -gdown==4.7.1 +future==1.0.0 + # via uncertainties +gdown==5.1.0 # via py4dstem -gevent==23.9.1 +gevent==24.2.1 # via gunicorn -greenlet==3.0.0 +greenlet==3.0.3 # via # gevent # playwright -gunicorn[gevent]==21.2.0 - # via crystal-toolkit (pyproject.toml) +gunicorn[gevent]==22.0.0 + # via crystal_toolkit (pyproject.toml) h11==0.14.0 # via # uvicorn # wsproto -h5py==3.10.0 +h5py==3.11.0 # via # emdfile # hdf5plugin # hiphive # ncempy # py4dstem -habanero==1.2.3 - # via crystal-toolkit (pyproject.toml) -hdf5plugin==4.2.0 +habanero==1.2.6 + # via crystal_toolkit (pyproject.toml) +hdf5plugin==4.4.0 # via py4dstem hiphive==1.2 - # via crystal-toolkit (pyproject.toml) -identify==2.5.31 + # via crystal_toolkit (pyproject.toml) +identify==2.5.36 # via pre-commit -idna==3.4 +idna==3.7 # via # anyio # jsonschema @@ -312,13 +305,13 @@ idna==3.4 # trio # urllib3 # yarl -ifermi==0.3.3 - # via crystal-toolkit (pyproject.toml) -imageio==2.31.6 +ifermi==0.3.4 + # via crystal_toolkit (pyproject.toml) +imageio==2.34.1 # via scikit-image imagesize==1.4.1 # via sphinx -importlib-metadata==6.8.0 +importlib-metadata==7.1.0 # via # dash # dask @@ -326,17 +319,20 @@ importlib-metadata==6.8.0 # jupyter-ydoc # jupyterlab-server # sphinx -importlib-resources==6.1.0 - # via matplotlib -inflect==7.0.0 + # typeguard +importlib-resources==6.4.0 + # via + # matplotlib + # spglib +inflect==7.2.1 # via robocrys iniconfig==2.0.0 # via pytest -ipykernel==6.26.0 +ipykernel==6.29.4 # via # nbclassic # notebook -ipython==8.17.2 +ipython==8.18.1 # via # ipykernel # jupyterlab @@ -346,13 +342,13 @@ ipython-genutils==0.2.0 # notebook isoduration==20.11.0 # via jsonschema -itsdangerous==2.1.2 +itsdangerous==2.2.0 # via flask jedi==0.19.1 # via ipython -jinja2==3.1.2 +jinja2==3.1.3 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # dephell # distributed # flask @@ -367,25 +363,25 @@ jmespath==1.0.1 # via # boto3 # botocore -joblib==1.3.2 +joblib==1.4.0 # via # dscribe # pymatgen # scikit-learn # scikit-optimize -jsbeautifier==1.14.9 +jsbeautifier==1.15.1 # via dash-extensions -json5==0.9.14 +json5==0.9.25 # via jupyterlab-server jsonpointer==2.4 # via jsonschema -jsonschema[format-nongpl]==4.19.2 +jsonschema[format-nongpl]==4.21.1 # via # jupyter-events # jupyterlab-server # maggma # nbformat -jsonschema-specifications==2023.7.1 +jsonschema-specifications==2023.12.1 # via jsonschema jupyter-client==7.4.9 # via @@ -394,7 +390,7 @@ jupyter-client==7.4.9 # nbclassic # nbclient # notebook -jupyter-core==5.5.0 +jupyter-core==5.7.2 # via # ipykernel # jupyter-client @@ -405,20 +401,20 @@ jupyter-core==5.5.0 # nbconvert # nbformat # notebook -jupyter-events==0.8.0 +jupyter-events==0.10.0 # via # jupyter-server # jupyter-server-fileid -jupyter-server==2.9.1 +jupyter-server==2.14.0 # via # jupyter-server-fileid # jupyterlab # jupyterlab-server # nbclassic # notebook-shim -jupyter-server-fileid==0.9.0 +jupyter-server-fileid==0.9.2 # via jupyter-server-ydoc -jupyter-server-terminals==0.4.4 +jupyter-server-terminals==0.5.3 # via jupyter-server jupyter-server-ydoc==0.8.0 # via jupyterlab @@ -426,42 +422,42 @@ jupyter-ydoc==0.2.5 # via # jupyter-server-ydoc # jupyterlab -jupyterlab==3.6.6 +jupyterlab==3.6.7 # via crystaltoolkit-extension -jupyterlab-pygments==0.2.2 +jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.25.0 +jupyterlab-server==2.27.1 # via jupyterlab kaleido==0.2.1 - # via crystal-toolkit (pyproject.toml) + # via crystal_toolkit (pyproject.toml) kiwisolver==1.4.5 # via matplotlib -latexcodec==2.0.1 +latexcodec==3.0.0 # via pybtex -lazy-loader==0.3 +lazy-loader==0.4 # via scikit-image -llvmlite==0.41.1 +llvmlite==0.42.0 # via numba locket==1.0.0 # via # distributed # partd -lxml==4.9.3 +lxml==5.2.1 # via # dash # nbconvert m2r==0.3.1 # via dephell -maggma==0.57.4 +maggma==0.65.0 # via mp-api -markupsafe==2.1.3 +markupsafe==2.1.5 # via # jinja2 # nbconvert # werkzeug -matminer==0.9.0 +matminer==0.9.2 # via robocrys -matplotlib==3.8.1 +matplotlib==3.8.4 # via # ase # boltztrap2 @@ -470,7 +466,7 @@ matplotlib==3.8.1 # py4dstem # pymatgen # vtk -matplotlib-inline==0.1.6 +matplotlib-inline==0.1.7 # via # ipykernel # ipython @@ -484,7 +480,7 @@ mongogrant==0.3.3 # via maggma mongomock==4.1.2 # via maggma -monty==2023.11.3 +monty==2024.4.17 # via # emmet-core # ifermi @@ -494,23 +490,27 @@ monty==2023.11.3 # pymatgen # robocrys more-itertools==9.1.0 - # via dash-extensions -mp-api==0.37.5 - # via crystal-toolkit (pyproject.toml) -mpire==2.8.0 + # via + # dash-extensions + # inflect +mp-api==0.41.2 + # via + # crystal_toolkit (pyproject.toml) + # robocrys +mpire==2.10.1 # via py4dstem mpmath==1.3.0 # via sympy -msgpack==1.0.7 +msgpack==1.0.8 # via # distributed # maggma # mp-api -multidict==6.0.4 +multidict==6.0.5 # via # aiohttp # yarl -multiprocess==0.70.15 +multiprocess==0.70.16 # via dash mypy-extensions==1.0.0 # via black @@ -518,23 +518,23 @@ nbclassic==1.0.0 # via # jupyterlab # notebook -nbclient==0.8.0 +nbclient==0.10.0 # via nbconvert nbconvert==6.5.4 # via # jupyter-server # nbclassic # notebook -nbformat==5.9.2 +nbformat==5.10.4 # via # jupyter-server # nbclassic # nbclient # nbconvert # notebook -ncempy==1.11.0 +ncempy==1.11.1 # via py4dstem -nest-asyncio==1.5.8 +nest-asyncio==1.6.0 # via # dash # ipykernel @@ -553,13 +553,13 @@ nodeenv==1.8.0 # via pre-commit notebook==6.5.6 # via jupyterlab -notebook-shim==0.2.3 +notebook-shim==0.2.4 # via nbclassic -numba==0.58.1 +numba==0.59.1 # via # hiphive # sparse -numpy==1.26.1 +numpy==1.26.4 # via # ase # boltztrap2 @@ -596,15 +596,15 @@ numpy==1.26.1 # tifffile # trainstation # trimesh -numpy-stl==3.0.1 +numpy-stl==3.1.1 # via meshcut -orjson==3.9.10 +orjson==3.10.1 # via maggma outcome==1.3.0.post0 # via trio -overrides==7.4.0 +overrides==7.7.0 # via jupyter-server -packaging==23.2 +packaging==24.0 # via # black # dask @@ -619,67 +619,69 @@ packaging==23.2 # jupyter-server # jupyterlab # jupyterlab-server + # lazy-loader # matplotlib # mongomock # nbconvert # plotly # pytest # scikit-image + # scikit-optimize # sphinx palettable==3.3.3 # via pymatgen -pandas==1.5.3 +pandas==2.2.2 # via # hiphive # matminer # pymatgen -pandocfilters==1.5.0 +pandocfilters==1.5.1 # via nbconvert -paramiko==3.3.1 +paramiko==3.4.0 # via sshtunnel -parso==0.8.3 +parso==0.8.4 # via jedi partd==1.4.1 # via dask -pathspec==0.11.2 +pathspec==0.12.1 # via black percy==2.0.2 # via dash -pexpect==4.8.0 +pexpect==4.9.0 # via # dephell-shells # ipython -pillow==10.0.1 +pillow==10.3.0 # via # imageio # matplotlib # scikit-image -platformdirs==3.11.0 +platformdirs==4.2.1 # via # black # jupyter-core # virtualenv -playwright==1.39.0 +playwright==1.43.0 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # pytest-playwright -plotly==5.18.0 +plotly==5.21.0 # via # dash # ifermi # pymatgen -pluggy==1.3.0 +pluggy==1.5.0 # via pytest -pre-commit==3.5.0 - # via crystal-toolkit (pyproject.toml) -prometheus-client==0.18.0 +pre-commit==3.7.0 + # via crystal_toolkit (pyproject.toml) +prometheus-client==0.20.0 # via # jupyter-server # nbclassic # notebook -prompt-toolkit==3.0.39 +prompt-toolkit==3.0.43 # via ipython -psutil==5.9.6 +psutil==5.9.8 # via # dash # distributed @@ -693,83 +695,82 @@ pubchempy==1.0.4 # via robocrys pure-eval==0.2.2 # via stack-data -py4dstem==0.14.7 - # via crystal-toolkit (pyproject.toml) -pyaml==23.9.7 +py4dstem==0.14.8 + # via crystal_toolkit (pyproject.toml) +pyaml==24.4.0 # via scikit-optimize -pybind11==2.11.1 +pybind11==2.12.0 # via dscribe pybtex==0.24.0 # via # emmet-core # pymatgen # robocrys -pycparser==2.21 +pycparser==2.22 # via cffi -pydantic==2.4.2 +pydantic==2.7.1 # via # emmet-core # fastapi - # inflect # maggma # pydantic-settings -pydantic-core==2.10.1 +pydantic-core==2.18.2 # via pydantic -pydantic-settings==2.0.3 +pydantic-settings==2.2.1 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # emmet-core # maggma -pydash==7.0.6 +pydash==8.0.1 # via maggma -pyee==11.0.1 +pyee==11.1.0 # via playwright pyfftw==0.13.1 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # ifermi -pygments==2.16.1 +pygments==2.17.2 # via # ipython # mpire # nbconvert # sphinx -pylops==2.1.0 +pylops==2.2.0 # via py4dstem -pymatgen==2023.10.11 +pymatgen==2024.4.13 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # emmet-core # ifermi # matminer # mp-api # robocrys -pymongo==4.6.0 +pymongo==4.7.0 # via # maggma # matminer # mongogrant pynacl==1.5.0 # via paramiko -pyopenssl==23.3.0 +pyopenssl==24.1.0 # via urllib3 -pyparsing==3.1.1 +pyparsing==3.1.2 # via matplotlib pysocks==1.7.1 # via # requests # urllib3 -pytest==7.4.3 +pytest==8.2.0 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # dash # pytest-base-url # pytest-playwright -pytest-base-url==2.0.0 +pytest-base-url==2.1.0 # via pytest-playwright -pytest-playwright==0.4.3 - # via crystal-toolkit (pyproject.toml) -python-dateutil==2.8.2 +pytest-playwright==0.4.4 + # via crystal_toolkit (pyproject.toml) +python-dateutil==2.9.0.post0 # via # arrow # botocore @@ -777,15 +778,15 @@ python-dateutil==2.8.2 # maggma # matplotlib # pandas -python-dotenv==1.0.0 +python-dotenv==1.0.1 # via pydantic-settings python-json-logger==2.0.7 # via jupyter-events -python-slugify==8.0.1 +python-slugify==8.0.4 # via pytest-playwright -python-utils==3.8.1 +python-utils==3.8.2 # via numpy-stl -pytz==2023.3.post1 +pytz==2024.1 # via pandas pyyaml==6.0.1 # via @@ -804,10 +805,10 @@ pyzmq==24.0.1 # nbclassic # notebook recommonmark==0.7.1 - # via crystal-toolkit (pyproject.toml) -redis==5.0.1 - # via crystal-toolkit (pyproject.toml) -referencing==0.30.2 + # via crystal_toolkit (pyproject.toml) +redis==5.0.4 + # via crystal_toolkit (pyproject.toml) +referencing==0.35.0 # via # jsonschema # jsonschema-specifications @@ -839,13 +840,13 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -robocrys==0.2.8 - # via crystal-toolkit (pyproject.toml) -rpds-py==0.10.6 +robocrys==0.2.9 + # via crystal_toolkit (pyproject.toml) +rpds-py==0.18.0 # via # jsonschema # referencing -ruamel-yaml==0.17.40 +ruamel-yaml==0.18.6 # via # dephell # maggma @@ -853,25 +854,25 @@ ruamel-yaml==0.17.40 # robocrys ruamel-yaml-clib==0.2.8 # via ruamel-yaml -s3transfer==0.7.0 +s3transfer==0.10.1 # via boto3 scikit-image==0.22.0 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # ifermi # py4dstem -scikit-learn==1.3.2 +scikit-learn==1.4.2 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # dscribe # hiphive # matminer # py4dstem # scikit-optimize # trainstation -scikit-optimize==0.9.0 +scikit-optimize==0.10.1 # via py4dstem -scipy==1.11.3 +scipy==1.13.0 # via # ase # boltztrap2 @@ -891,29 +892,29 @@ scipy==1.11.3 # trainstation selenium==4.2.0 # via dash -send2trash==1.8.2 +send2trash==1.8.3 # via # jupyter-server # nbclassic # notebook sentinels==1.0.0 # via mongomock -shapely==2.0.2 - # via crystal-toolkit (pyproject.toml) +shapely==2.0.4 + # via crystal_toolkit (pyproject.toml) shellingham==1.5.4 # via dephell-shells six==1.16.0 # via # asttokens # bleach - # gdown # jsbeautifier - # latexcodec # pybtex # python-dateutil # retrying # rfc3339-validator -sniffio==1.3.0 +smart-open==7.0.4 + # via mp-api +sniffio==1.3.1 # via # anyio # trio @@ -925,46 +926,41 @@ sortedcontainers==2.4.0 # trio soupsieve==2.5 # via beautifulsoup4 -sparse==0.14.0 +sparse==0.15.1 # via dscribe -spglib==2.1.0 +spglib==2.4.0 # via # boltztrap2 # hiphive # ifermi # pymatgen # robocrys -sphinx==7.2.6 +sphinx==7.3.7 # via # recommonmark # sphinx-rtd-theme - # sphinxcontrib-applehelp - # sphinxcontrib-devhelp - # sphinxcontrib-htmlhelp # sphinxcontrib-jquery - # sphinxcontrib-qthelp - # sphinxcontrib-serializinghtml -sphinx-rtd-theme==1.3.0 - # via crystal-toolkit (pyproject.toml) -sphinxcontrib-applehelp==1.0.7 +sphinx-rtd-theme==2.0.0 + # via crystal_toolkit (pyproject.toml) +sphinxcontrib-applehelp==1.0.8 # via sphinx -sphinxcontrib-devhelp==1.0.5 +sphinxcontrib-devhelp==1.0.6 # via sphinx -sphinxcontrib-htmlhelp==2.0.4 +sphinxcontrib-htmlhelp==2.0.5 # via sphinx sphinxcontrib-jquery==4.1 # via sphinx-rtd-theme sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.6 +sphinxcontrib-qthelp==1.0.7 # via sphinx -sphinxcontrib-serializinghtml==1.1.9 +sphinxcontrib-serializinghtml==1.1.10 # via sphinx sshtunnel==0.4.0 # via maggma stack-data==0.6.3 # via ipython -starlette==0.27.0 +starlette==0.37.2 # via fastapi sympy==1.12 # via @@ -981,7 +977,7 @@ tenacity==8.2.3 # via plotly termcolor==2.3.0 # via yaspin -terminado==0.17.1 +terminado==0.18.1 # via # jupyter-server # jupyter-server-terminals @@ -989,27 +985,28 @@ terminado==0.17.1 # notebook text-unidecode==1.3 # via python-slugify -threadpoolctl==3.2.0 +threadpoolctl==3.4.0 # via # py4dstem # scikit-learn -tifffile==2023.9.26 +tifffile==2024.4.24 # via scikit-image -tinycss2==1.2.1 +tinycss2==1.3.0 # via nbconvert tomli==2.0.1 # via # black # jupyterlab # pytest -tomlkit==0.12.2 + # sphinx +tomlkit==0.12.4 # via dephell -toolz==0.12.0 +toolz==0.12.1 # via # dask # distributed # partd -tornado==6.3.3 +tornado==6.4 # via # distributed # ipykernel @@ -1019,7 +1016,7 @@ tornado==6.3.3 # nbclassic # notebook # terminado -tqdm==4.66.1 +tqdm==4.66.2 # via # emdfile # gdown @@ -1031,7 +1028,7 @@ tqdm==4.66.1 # pymatgen trainstation==1.0 # via hiphive -traitlets==5.13.0 +traitlets==5.14.3 # via # comm # ipykernel @@ -1046,19 +1043,23 @@ traitlets==5.13.0 # nbconvert # nbformat # notebook -trimesh==4.0.2 +trimesh==4.3.1 # via ifermi -trio==0.23.0 +trio==0.25.0 # via # selenium # trio-websocket trio-websocket==0.11.1 # via selenium -types-python-dateutil==2.8.19.14 +typeguard==4.2.1 + # via inflect +types-python-dateutil==2.9.0.20240316 # via arrow -typing-extensions==4.8.0 +typing-extensions==4.11.0 # via # aioitertools + # aiosqlite + # anyio # black # dash # dataclass-wizard @@ -1073,7 +1074,10 @@ typing-extensions==4.8.0 # pyee # python-utils # starlette + # typeguard # uvicorn +tzdata==2024.1 + # via pandas uncertainties==3.1.7 # via pymatgen uri-template==1.3.0 @@ -1086,51 +1090,53 @@ urllib3[secure,socks]==1.26.18 # selenium urllib3-secure-extra==0.1.0 # via urllib3 -uvicorn==0.23.2 +uvicorn==0.29.0 # via maggma -virtualenv==20.24.6 +virtualenv==20.26.0 # via pre-commit -vtk==9.2.6 +vtk==9.3.0 # via dash-vtk -waitress==2.1.2 +waitress==3.0.0 # via dash -wcwidth==0.2.9 +wcwidth==0.2.13 # via prompt-toolkit webcolors==1.13 # via - # crystal-toolkit (pyproject.toml) + # crystal_toolkit (pyproject.toml) # jsonschema webencodings==0.5.1 # via # bleach # tinycss2 -websocket-client==1.6.4 +websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.1 +werkzeug==3.0.2 # via # dash # flask +wrapt==1.16.0 + # via smart-open wsproto==1.2.0 # via trio-websocket y-py==0.6.2 # via # jupyter-ydoc # ypy-websocket -yarl==1.9.2 +yarl==1.9.4 # via aiohttp -yaspin==3.0.1 +yaspin==3.0.2 # via dephell ypy-websocket==0.8.4 # via jupyter-server-ydoc zict==3.0.0 # via distributed -zipp==3.17.0 +zipp==3.18.1 # via # importlib-metadata # importlib-resources zope-event==5.0 # via gevent -zope-interface==6.1 +zope-interface==6.3 # via gevent # The following packages are considered to be unsafe in a requirements file: