plotting
Folders and files
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Scripts for plotting results and contact locations. The different files are: - "dbs_lfp_locations": plot DBS leads in the STN (Figure 2a) - "ecog_lfp_locations": plot ECoG contacts on the cortex (Figure 2a) - "fmri_lme_coeffs_indirect_nuclei": plot indirect pathway nuclei according to fMRI-LME coefficients (Figure 4b) - "imcoh": plot ImCoh (Figure 3a & 3b) - "mic_patterns_hyperdirect_fibres": plot hyperdirect fibres coloured according to MIC patterns (Figure 4a) - "mic_patterns": create interpolated MIC patterns and plot raw points (Figures 3a, S7) - "power": plot power (univariate and multivariate; Figures 2, S1, & S2) - "ssd_patterns_dbs_contacts": plot SSD patterns for DBS contacts (Figure 2c) - "ssd_patterns": create interpolated SSD patterns and plot raw points (Figures 2b, S3, & S4) - "tde": plot time delay estimates (Figure 3d) - "trgc": plot TRGC (Figures 3c, S5, & S6) There are 2 general types of files: - "MedOffOn": for comparing OFF therapy and ON levodopa results - "StimOffOn": for comparing OFF therapy and ON STN-DBS results Files have some shared constants: - "FOLDERPATH_ANALYSIS": directory where the analysis settings are stored and where the results will be stored (e.g. in "Project/Analysis")