forked from facebookresearch/faiss
-
Notifications
You must be signed in to change notification settings - Fork 1
/
AuxIndexStructures.cpp
216 lines (169 loc) · 4.97 KB
/
AuxIndexStructures.cpp
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
/**
* Copyright (c) 2015-present, Facebook, Inc.
* All rights reserved.
*
* This source code is licensed under the BSD+Patents license found in the
* LICENSE file in the root directory of this source tree.
*/
// Copyright 2004-present Facebook. All Rights Reserved
// -*- c++ -*-
#include "AuxIndexStructures.h"
#include <cstring>
namespace faiss {
/***********************************************************************
* RangeSearchResult
***********************************************************************/
RangeSearchResult::RangeSearchResult (idx_t nq, bool alloc_lims): nq (nq) {
if (alloc_lims) {
lims = new size_t [nq + 1];
memset (lims, 0, sizeof(*lims) * (nq + 1));
} else {
lims = nullptr;
}
labels = nullptr;
distances = nullptr;
buffer_size = 1024 * 256;
}
/// called when lims contains the nb of elements result entries
/// for each query
void RangeSearchResult::do_allocation () {
size_t ofs = 0;
for (int i = 0; i < nq; i++) {
size_t n = lims[i];
lims [i] = ofs;
ofs += n;
}
lims [nq] = ofs;
labels = new idx_t [ofs];
distances = new float [ofs];
}
RangeSearchResult::~RangeSearchResult () {
delete [] labels;
delete [] distances;
delete [] lims;
}
/***********************************************************************
* BufferList
***********************************************************************/
BufferList::BufferList (size_t buffer_size):
buffer_size (buffer_size)
{
wp = buffer_size;
}
BufferList::~BufferList ()
{
for (int i = 0; i < buffers.size(); i++) {
delete [] buffers[i].ids;
delete [] buffers[i].dis;
}
}
void BufferList::append_buffer ()
{
Buffer buf = {new idx_t [buffer_size], new float [buffer_size]};
buffers.push_back (buf);
wp = 0;
}
/// copy elemnts ofs:ofs+n-1 seen as linear data in the buffers to
/// tables dest_ids, dest_dis
void BufferList::copy_range (size_t ofs, size_t n,
idx_t * dest_ids, float *dest_dis)
{
size_t bno = ofs / buffer_size;
ofs -= bno * buffer_size;
while (n > 0) {
size_t ncopy = ofs + n < buffer_size ? n : buffer_size - ofs;
Buffer buf = buffers [bno];
memcpy (dest_ids, buf.ids + ofs, ncopy * sizeof(*dest_ids));
memcpy (dest_dis, buf.dis + ofs, ncopy * sizeof(*dest_dis));
dest_ids += ncopy;
dest_dis += ncopy;
ofs = 0;
bno ++;
n -= ncopy;
}
}
/***********************************************************************
* RangeSearchPartialResult
***********************************************************************/
RangeSearchPartialResult::RangeSearchPartialResult (RangeSearchResult * res_in):
BufferList(res_in->buffer_size),
res(res_in)
{}
/// begin a new result
RangeSearchPartialResult::QueryResult &
RangeSearchPartialResult::new_result (idx_t qno)
{
QueryResult qres = {qno, 0, this};
queries.push_back (qres);
return queries.back();
}
void RangeSearchPartialResult::finalize ()
{
set_lims ();
#pragma omp barrier
#pragma omp single
res->do_allocation ();
#pragma omp barrier
set_result ();
}
/// called by range_search before do_allocation
void RangeSearchPartialResult::set_lims ()
{
for (int i = 0; i < queries.size(); i++) {
QueryResult & qres = queries[i];
res->lims[qres.qno] = qres.nres;
}
}
/// called by range_search after do_allocation
void RangeSearchPartialResult::set_result (bool incremental)
{
size_t ofs = 0;
for (int i = 0; i < queries.size(); i++) {
QueryResult & qres = queries[i];
copy_range (ofs, qres.nres,
res->labels + res->lims[qres.qno],
res->distances + res->lims[qres.qno]);
if (incremental) {
res->lims[qres.qno] += qres.nres;
}
ofs += qres.nres;
}
}
/***********************************************************************
* IDSelectorRange
***********************************************************************/
IDSelectorRange::IDSelectorRange (idx_t imin, idx_t imax):
imin (imin), imax (imax)
{
}
bool IDSelectorRange::is_member (idx_t id) const
{
return id >= imin && id < imax;
}
/***********************************************************************
* IDSelectorBatch
***********************************************************************/
IDSelectorBatch::IDSelectorBatch (long n, const idx_t *indices)
{
nbits = 0;
while (n > (1L << nbits)) nbits++;
nbits += 5;
// for n = 1M, nbits = 25 is optimal, see P56659518
mask = (1L << nbits) - 1;
bloom.resize (1UL << (nbits - 3), 0);
for (long i = 0; i < n; i++) {
long id = indices[i];
set.insert(id);
id &= mask;
bloom[id >> 3] |= 1 << (id & 7);
}
}
bool IDSelectorBatch::is_member (idx_t i) const
{
long im = i & mask;
if(!(bloom[im>>3] & (1 << (im & 7)))) {
return 0;
}
return set.count(i);
}
}