.gitignore

# Python Wrapper Generated Files
wrapper/build/
wrapper/dist/
wrapper/dtw.egg-info/

# Object files
*.o
*.so
libClarity.so*
*.obj

#kmer files
kmer_models/

#python files
*.pyc

#txt docs
*.txt

#executables
magenta_bulk_index
magenta_index
magenta
magenta_multi_index
magenta_ml_dtw
check_bulk_data
maxwell
flash_test
magenta_short_index
fasta2signal
fasta2prefixes
tests/magenta_utils_test
tests/flash_utils_test
tests/UCR_Suite/UCR_DTW
tests/UCR_Suite/UCR_DTW_BIN
tests/UCR_Suite/UCR_ED
tests/UCR_Suite/UCR_ED_BIN
tests/flash_dtw_test
tests/segmentation_test
tests/all_utils_test
tests/cuda_utils_test
tests/ont_utils_test
segment_data
*.exe
*.out

#tests
tests/tests/

#dll files
*.dll

#lib files
*.lib

#exp files
*.exp

#pdb files
*.pdb

#test-related directories and files
tests/output_tests/

#bak files
*.bak

#.vs folder
.vs/

#grpc files
include/minknow_api/*.pb.h
include/minknow_api/*.pb.cc

#lib directory
lib\

#bin directory
bin/

#bin files
sample_data/E_coli/*.bin*

#Visual Studio files
*.sln
*.VC*

#Linux files
*.nfs*

#R data
tests/.RData
tests/.Rhistory

#log folder
log/