chore: Upgrade Python requirements

[edx-requirements-bot]

Python requirements update. Please review the changelogs for the upgraded packages.

Deleted obsolete pull_requests:
#120

[edx-requirements-bot]

List of packages in the PR without any issue.

• astroid changes from 3.1.0 to 3.3.5
• build changes from 1.2.1 to 1.2.2.post1
• cachetools changes from 5.3.3 to 5.5.0
• certifi changes from 2024.2.2 to 2024.8.30
• charset-normalizer changes from 3.3.2 to 3.4.0
• code-annotations changes from 1.7.0 to 1.8.0
• coverage changes from 7.4.4 to 7.6.4
• dill changes from 0.3.8 to 0.3.9
• distlib changes from 0.3.8 to 0.3.9
• edx-lint changes from 5.3.6 to 5.4.1
• filelock changes from 3.13.3 to 3.16.1
• idna changes from 3.6 to 3.10
• jinja2 changes from 3.1.3 to 3.1.4
• lxml changes from 5.2.1 to 5.3.0
• packaging changes from 24.0 to 24.2
• pbr changes from 6.0.0 to 6.1.0
• pip changes from 24.0 to 24.2
• platformdirs changes from 4.2.0 to 4.3.6
• pluggy changes from 1.4.0 to 1.5.0
• pycodestyle changes from 2.11.1 to 2.12.1
• pylint changes from 3.1.0 to 3.3.1
• pylint-django changes from 2.5.5 to 2.6.1
• pyparsing changes from 3.1.2 to 3.2.0
• pyproject-api changes from 1.6.1 to 1.8.0
• pyproject-hooks changes from 1.0.0 to 1.2.0
• pyyaml changes from 6.0.1 to 6.0.2
• requests changes from 2.31.0 to 2.32.3
• scipy changes from 1.10.1 to 1.14.1
• stevedore changes from 5.2.0 to 5.3.0
• sympy changes from 1.12 to 1.13.3
• tomlkit changes from 0.12.4 to 0.13.2
• tox changes from 4.14.2 to 4.23.2
• urllib3 changes from 2.2.1 to 2.2.3
• virtualenv changes from 20.25.1 to 20.27.1
• wheel changes from 0.43.0 to 0.45.0

[edx-requirements-bot]

These Packages need manual review..

• [REMOVED] coverage (6.5.0) removed from the requirements
• [NEW] coverage[toml] (7.6.4) added to the requirements
• [MAJOR] coveralls changes from 3.3.1 to 4.0.1
• [REMOVED] importlib-metadata (6.11.0) removed from the requirements
• [MAJOR] markupsafe changes from 2.1.5 to 3.0.2
• [MAJOR] numpy changes from 1.24.4 to 2.1.3
• [MAJOR] setuptools changes from 69.2.0 to 75.3.0
• [REMOVED] tomli (2.0.1) removed from the requirements
• [REMOVED] typing-extensions (4.10.0) removed from the requirements
• [REMOVED] zipp (3.18.1) removed from the requirements

[edx-requirements-bot]

Closing obsolete PR.