Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add do_not_annotate field to go_classification table #61

Open
dustine32 opened this issue Aug 8, 2024 · 1 comment
Open

Add do_not_annotate field to go_classification table #61

dustine32 opened this issue Aug 8, 2024 · 1 comment
Assignees

Comments

@dustine32
Copy link
Collaborator

Add a column indicating if a GO term has attribute "do not annotate." The source data for this field will come from:
http://current.geneontology.org/ontology/subsets/gocheck_do_not_annotate.owl

This data should be downloaded from GO current on every full GO update and parsed into inputforGOClassification.tsv.

@dustine32 dustine32 self-assigned this Aug 8, 2024
@dustine32
Copy link
Collaborator Author

As discussed on 2024-10-09 PAINT call, we will make 2 new boolean columns do_not_annotate and obsoletion_candidate.

Even if these two attributes are treated the same in the PAINT tool, it still may be useful for information purposes (e.g., warning messages).

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant