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#Coreference resolution in clinical documents ########################################################## TO RUN END TO END PIPELINE: go the /end_to_end folder Place the input file in the /input folder Run the following command on terminal: ./run.sh <name of the file you want to run from input folder> The output will be generated in the /output folder You can check output for mention pairs, coreferent pairs, chains TO RUN CEAF BASED EVALUATION ON THE OUTPUT: go the /end_to_end folder run the following command on terminal: python evaluation.py <path to the chains file generated by system> <path to the gold mentions chain file> ############################################################## ############################################################## PREREQUISITES: CLAMP command line tool Stanford CoreNLP toolkit Stanford ner toolkit python packages: genderize inflect ##############################################################
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