-
Notifications
You must be signed in to change notification settings - Fork 17
/
bids_geteventfieldsfromfolder.m
53 lines (50 loc) · 2.28 KB
/
bids_geteventfieldsfromfolder.m
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
% bids_geteventfiledsfromfolder() - Scan bids folders recursively to get the list of event fields
% from the first events.tsv file
%
% Usage:
% >> fields = bids_geteventfieldsfromfolder(bidsfolder);
%
% Inputs:
% bidsfolder - a loaded epoched EEG dataset structure.
%
% Outputs:
% fields - [cell array] list of event fields in events.tsv
%
% Authors: Dung Truong, Arnaud Delorme, SCCN, INC, UCSD, March, 2022
% Copyright (C) Dung Truong, 2022
%
% This program is free software; you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the Free Software Foundation; either version 2 of the License, or
% (at your option) any later version.
%
% This program is distributed in the hope that it will be useful,
% but WITHOUT ANY WARRANTY; without even the implied warranty of
% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
% GNU General Public License for more details.
%
% You should have received a copy of the GNU General Public License
% along with this program; if not, to the Free Software
% Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
function fields = bids_geteventfieldsfromfolder(bidsFolder)
fields = {};
files = dir(bidsFolder);
[files(:).folder] = deal(bidsFolder);
%fprintf('Scanning %s\n', bidsFolder);
for iFile = 1:length(files)
if files(iFile).isdir && files(iFile).name(1) ~= '.'
fieldlistTmp = bids_geteventfieldsfromfolder(fullfile(files(iFile).folder, fullfile(files(iFile).name)));
if ~isempty(fieldlistTmp)
fieldsTmp = setdiff(fieldlistTmp, {'onset', 'duration', 'sample', 'stim_file', 'response_time'});
fields = union(fields, fieldsTmp);
end
else
if ~isempty(strfind(files(iFile).name, 'events.tsv'))
res = loadtxt( fullfile(files(iFile).folder, files(iFile).name), 'verbose', 'off', 'delim', 9, 'convert', 'off');
fields = union(fields, res(1,:));
% % other solutions
% res = readtable( fullfile(files(iFile).folder, files(iFile).name), 'filetype', 'delimitedtext', 'delimiter', char(9));
% fields = union(fields, fieldnames(res)); % has additional fields Properties, Rows and Variables that need to be removeds
end
end
end