mcell_add_gene_stat

[chenx9]

when I run this step ,I get:
mcell_add_gene_stat(gstat_id="test", mat_id="test", force=T)
Calculating gene statistics... will downsamp
done downsamp
will gen mat_n
done gen mat_n
done computing basic gstat, will compute trends
Error in $<-.data.frame(*tmp*, "sz_cor", value = c(A1BG = -0.001, :
replacement has 26837 rows, data has 18447
In addition: Warning message:
In mclapply(argsList, FUN, mc.preschedule = preschedule, mc.set.seed = set.seed, :
scheduled cores 1, 2, 3, 5, 7 did not deliver results, all values of the jobs will be affected

[f6v]

I have the same issue when trying to run the melanoma paper code tanaylab/li_et_al_cell_2018_melanoma_scrna#1

@chenx9 have you ever figured this out?

[Judikael-Saout]

Hi,

I also have this error, has anyone managed to solve it? @f6v @chenx9

[f6v]

@Judikael-Saout not really.