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CTF file

Utz Ermel edited this page Nov 6, 2019 · 1 revision

CTF files are files of the *.em format. A CTF file contains information about the defocus and astigmatism determined for each projection of a tilt stack (or each z-slice of any mrc-stack), as determined by CTFDetector.

Specification

CTF files are N x 5 matrices of type double for N projections.

Row Header text
1 CC-value of measured CTF with computed CTF (not used in EmSART)
2 Lower defocus value - in nano meters
3 Upper defocus value (for astigmatism) - in nano meters
4 Astigmatism difference (equals column 3 minus column 2)
5 Astigmatism angle in radians