Skip to content

Commit

Permalink
.fa to .fasta in GL-gen-metagenomics-JIRA
Browse files Browse the repository at this point in the history
  • Loading branch information
AstrobioMike committed Mar 23, 2021
1 parent b6218bf commit 3309494
Show file tree
Hide file tree
Showing 2 changed files with 3 additions and 3 deletions.
4 changes: 2 additions & 2 deletions GL-gen-metagenomics-JIRA
Original file line number Diff line number Diff line change
Expand Up @@ -183,13 +183,13 @@ def gen_and_write_out_filenames_table(sample_names):

if os.path.exists(bins_dir + "bins-overview.tsv"):
bins_col = ["bins-overview.tsv"]
bins_dir_files = [file for file in os.listdir(bins_dir) if file.endswith(".fa")]
bins_dir_files = [file for file in os.listdir(bins_dir) if file.endswith(".fasta")]
else:
bins_col = [""]

if os.path.exists(MAGs_dir + "MAGs-overview.tsv"):
MAGs_col = ["MAGs-overview.tsv"]
MAGs_dir_files = [file for file in os.listdir(MAGs_dir) if file.endswith(".fa")]
MAGs_dir_files = [file for file in os.listdir(MAGs_dir) if file.endswith(".fasta")]
else:
MAGs_col = [""]

Expand Down
2 changes: 1 addition & 1 deletion GL-version
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
#!/usr/bin/env bash

version='1.0.04'
version='1.0.05'

GREEN='\033[0;32m'
NC='\033[0m'
Expand Down

0 comments on commit 3309494

Please sign in to comment.