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[ENG-3836] Follow-up: Add PyYAML to Requirements #9993

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merged 1 commit into from
Jul 27, 2022
Merged

[ENG-3836] Follow-up: Add PyYAML to Requirements #9993

merged 1 commit into from
Jul 27, 2022

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cslzchen
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@cslzchen cslzchen commented Jul 27, 2022 •
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Purpose

Add PyYAML to Requirements

Changes

Jenkins build failure reveals a missing package PyYAML which is introduced in import yaml.

However, we all missed this one since builds consistently succeed in both local and GitHub action. This is because PyYAML is a dependency of pre-commit which is not available for server builds.

QA Notes

N/A

Documentation

N/A

Side Effects

N/A

Ticket

https://openscience.atlassian.net/browse/ENG-3836 follow-up fix

@cslzchen cslzchen marked this pull request as ready for review July 27, 2022 20:52
@cslzchen cslzchen changed the title Add PyYAML to Requirements [Django Upgrade] Add PyYAML to Requirements Jul 27, 2022
@cslzchen cslzchen changed the title [Django Upgrade] Add PyYAML to Requirements [ENG-3836] Follow-up: Add PyYAML to Requirements Jul 27, 2022
@cslzchen cslzchen merged commit 8052ea4 into CenterForOpenScience:feature/django_upgrade Jul 27, 2022
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Jul 27, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
e364d68 
…OpenScience/osf.io into upguard-indexes

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Jul 27, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
0660254 
…OpenScience/osf.io into signal-create-providers-2

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)

# Conflicts:
#	osf/apps.py
#	osf/migrations/__init__.py
#	osf_tests/test_registration_bulk_upload_parser.py
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Jul 28, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
75e5a09 
…OpenScience/osf.io into upgrade-import-paths

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Jul 28, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
d00e268 
…OpenScience/osf.io into upgrade-markdown

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Jul 28, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
92e9c2a 
…OpenScience/osf.io into upgrade-password-reset

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Aug 3, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
89bfd0f 
…OpenScience/osf.io into django-3-with-django-include

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3862] Move post-migrate signal out of migration stream for default providers (CenterForOpenScience#9971)
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)

# Conflicts:
#	api/base/settings/defaults.py
#	osf/apps.py
#	osf/migrations/0138_ensure_subjects_and_providers.py
#	osf/migrations/__init__.py
#	osf/models/provider.py
#	osf_tests/test_registration_bulk_upload_parser.py
#	website/settings/defaults.py
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Aug 3, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
bc7f3e1 
…OpenScience/osf.io into django-3-with-django-include

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3862] Move post-migrate signal out of migration stream for default providers (CenterForOpenScience#9971)
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)

# Conflicts:
#	api/base/settings/defaults.py
#	osf/apps.py
#	osf/migrations/0138_ensure_subjects_and_providers.py
#	osf/migrations/__init__.py
#	osf/models/provider.py
#	osf_tests/test_registration_bulk_upload_parser.py
#	website/settings/defaults.py
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Aug 3, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
6a3c406 
…OpenScience/osf.io into django-3-with-django-include

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3862] Move post-migrate signal out of migration stream for default providers (CenterForOpenScience#9971)
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)

# Conflicts:
#	api/base/settings/defaults.py
#	osf/apps.py
#	osf/migrations/0138_ensure_subjects_and_providers.py
#	osf/migrations/__init__.py
#	osf/models/provider.py
#	osf_tests/test_registration_bulk_upload_parser.py
#	website/settings/defaults.py
Johnetordoff pushed a commit to Johnetordoff/osf.io that referenced this pull request Aug 4, 2022
Merge branch 'feature/django_upgrade' of https://github.com/CenterFor…
7c845bb 
…OpenScience/osf.io into remove-django-debug-toolbar

* 'feature/django_upgrade' of https://github.com/CenterForOpenScience/osf.io:
  [ENG-3862] Move post-migrate signal out of migration stream for default providers (CenterForOpenScience#9971)
  [ENG-3836] Follow-up: Add PyYAML to Requirements (CenterForOpenScience#9993)
  [ENG-3867] Create Storage Regions on post migration signal (CenterForOpenScience#9965)
  [ENG-3866] Move citation style population out of migration stream (CenterForOpenScience#9966)
  [ENG-3868] Move blocked email domains to post-migrate signal (CenterForOpenScience#9958)
  [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (CenterForOpenScience#9974)
  [ENG-3865] Create Licenses using post-migrate signal (CenterForOpenScience#9961)
  [ENG-3836] Investigate waffle flags (CenterForOpenScience#9950)
  move createcachetable to post migrate signal (CenterForOpenScience#9944)
  remove post-migrate signals from migration stream (CenterForOpenScience#9964)
  [ENG-3898][ENG-3899]Model support for OutcomeArtifact update and delete (CenterForOpenScience#9989)
  Make OutcomeArtifact.identifier nullable (CenterForOpenScience#9986)
  [ENG-3894] Outcome models (CenterForOpenScience#9975)
  revert color picker to working version (CenterForOpenScience#9968)

# Conflicts:
#	osf/apps.py
#	osf/migrations/__init__.py
#	osf_tests/test_registration_bulk_upload_parser.py
cslzchen added a commit that referenced this pull request Sep 1, 2022
@cslzchen
[ENG-3836] Follow-up: Add PyYAML to Requirements (#9993)
60d763f
cslzchen added a commit that referenced this pull request Sep 22, 2022
@cslzchen
[ENG-3836] Follow-up: Add PyYAML to Requirements (#9993)
80998f1
cslzchen added a commit that referenced this pull request Oct 20, 2022
@cslzchen
[ENG-3836] Follow-up: Add PyYAML to Requirements (#9993)
0a447f8
mfraezz pushed a commit that referenced this pull request Oct 21, 2022
@cslzchen @Johnetordoff @jwalz
[ENG-3651] Django3 Upgrade (#10078)
2896ff0 
PRs:
* remove post-migrate signals from migration stream (#9964)
* move createcachetable to post migrate signal (#9944)
* [ENG-3836] Investigate waffle flags (#9950)
* [ENG-3865] Create Licenses using post-migrate signal (#9961)
* [ENG-3863] Move schema ensuring and schema blocks update to post-migrate signals (#9974)
* [ENG-3868] Move blocked email domains to post-migrate signal (#9958)
* [ENG-3866] Move citation style population out of migration stream (#9966)
* [ENG-3867] Create Storage Regions on post migration signal (#9965)
* [ENG-3836] Follow-up: Add PyYAML to Requirements (#9993)
* [ENG-3862] Move post-migrate signal out of migration stream for default providers (#9971)
* Remove unused password change view/route (#9985)
* Update import paths and fix deprecated modules for Django 3 (#9983)
* Update postgres backend and remove failover router for Django 3 (#10011)
* Move file metadata population to unit test fixtures (#9994)
* [Django Upgrade] Fix one sub-query slicing issue (#10012)
* [Django Upgrade] Upgrade django-elasticsearch-metrics (#10021)
* [Django Upgrade] Replace M2M direct assignment  (#10010)
* [Django Upgrade] Upgrade markdown and mdx_del_ins (#9984)
* [Django Upgrade] Move schema activeness/visibility update to pytest fixtures (#10029)

Commits:
* Remove osf migrations
* Remove addon migrations
* Init migrations - osf
* Init migrations - addons
* Fix migration for NotableEmailDomain
* Fix circular import with built-in admin migrations
* Add a RunSQL migration to update indexes
* Upgrade django to 3.2.15 (and related dependencies)
* Make fields defined on typedmodels subclasses nullable
* Add required on_delete=CASCADE (default) to FKs missing it
* Fix django CORS whitelist settings due to origin definition update
* Add/Enable missing templates and middlewares in api settings
* Comment out admin permissions that clash with built-in "view" ones
* Add migrations for django upgrade base fixes
* Fix system check warnings for django admin
* Fix django cache table creation
* Enable django.contrib.sessions.middleware.SessionMiddleware
* Use default truthy and falsy values from upgraded DRF 3.13.1
* Use JsonField from django.db.models and django.forms
* Fix session cookie encoding/decoding by using ensure_str()
* Use prefetch instead of Django include
* Fix CORS for ORIGINS_WHITELIST
* Rename auto generated migration for django3 upgrade fixes
* Remove QuickFile check from get_serializer_class for FileDetail view
* Add registration_schema to DraftRegistrationDetailSerializer
* Add id to DraftRegistrationDetailSerializer
* Fix middleware order and replace deprecated staticfiles with static
* Fix and rework from_db_value & to_python for EncryptedJSONField
* Fix admin login failure for django upgrade
* Wrap generated keen_read_key with ensure_str
* Clear cached storage region property when creating a new version
* Do not notify in set_password() when creating a test user
* Fix RegistrationFactory for django3 upgrade
* Remove unused update_version_metadata in file node and update tests
* Remove tests for django-include
* Remove EGAP backfill command and tests
* Set DEFAULT_AUTO_FIELD to django.db.models.AutoField (default value)
* Replace deprecated NullBooleanField + add migrations
* Replace deprecated url() with re_path() for api
* Replace deprecated url() with re_path() for admin
* Fix missing or insufficient permission test for admin preprints view
* Fix admin user view tests by using HTTP response headers object
* Fix duplicate view_node permissions in node and instn view tests
* Rework refresh_from_db() to reload GFKs
* Fix visible contributor query
* Fix handle_archive_fail and its tests
* Use a different schema to fix tests failure due to django3 upgrade
* Update URLs for URL Validation tests with Django 3
* Improve to_internal_value() in NodeRelationshipField
* Add alt fixtures to prevent both siblings & parent/child conflicts
* Fix linked_by_nodes in node related counts test
* Fix bugged NullBooleanField -> BooleanField migration
* Re-make migrations for django3 upgrade and merge them into one

Co-authored-by: Longze Chen <[email protected]>
Co-authored-by: John Tordoff <[email protected]>
Co-authored-by: Jon Walz <[email protected]>
@cslzchen cslzchen mentioned this pull request Aug 8, 2023
Closed
@cslzchen cslzchen deleted the add-pyyaml branch October 9, 2024 16:12
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