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Cleaned up cropping notebooks #4211

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merged 2 commits into from
Dec 19, 2020
Merged

Cleaned up cropping notebooks #4211

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76a2678
Cleaned up cropping notebooks
AustinSanders Dec 18, 2020
67784b7
Merge branch 'dev' of https://github.com/USGS-Astrogeology/ISIS3 into…
acpaquette Dec 18, 2020
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206 changes: 93 additions & 113 deletions isis/notebooks/crop_chandrayaan.ipynb
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174 changes: 14 additions & 160 deletions isis/notebooks/crop_crism.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,9 @@
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"import pvl\n",
Expand All @@ -30,7 +32,9 @@
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"header = pvl.load(crism_file)"
Expand Down Expand Up @@ -146,11 +150,12 @@
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"with open(crism_file, 'rb') as f:\n",
" # If detached label, \"^IMAGE\" will be a list.\n",
" image_file = os.path.dirname(crism_file) + \"/\" + header[\"^IMAGE\"].lower()\n",
" with open(image_file, 'rb') as im_f:\n",
" b_image_data = im_f.read()"
Expand All @@ -171,7 +176,9 @@
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"image_data = []\n",
Expand Down Expand Up @@ -212,7 +219,7 @@
}
],
"source": [
"plt.imshow(image_data, cmap='magma')"
"plt.imshow(image_data)"
]
},
{
Expand All @@ -234,23 +241,6 @@
"header['FILE_RECORDS'] = n_lines -1\n"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [],
"source": [
"class RealIsisCubeLabelEncoder(pvl.encoder.ISISEncoder): \n",
" def encode_time(self, value):\n",
" if value.microsecond:\n",
" second = u'%02d.%06d' % (value.second, value.microsecond)\n",
" else:\n",
" second = u'%02d' % value.second\n",
"\n",
" time = u'%02d:%02d:%s' % (value.hour, value.minute, second)\n",
" return time"
]
},
{
"cell_type": "code",
"execution_count": 11,
Expand All @@ -273,7 +263,7 @@
"\n",
"grammar = pvl.grammar.ISISGrammar()\n",
"grammar.comments+=((\"#\", \"\\n\"), )\n",
"encoder = RealIsisCubeLabelEncoder()\n",
"encoder = pvl.encoder.ISISEncoder()\n",
"pvl.dump(header, out_label, encoder=encoder, grammar=grammar)"
]
},
Expand All @@ -290,142 +280,6 @@
" f.seek(0, 2)\n",
" f.write(b_reduced_image_data)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": []
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"header = pvl.load(out_label)"
]
},
{
"cell_type": "code",
"execution_count": 14,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"PVLModule([\n",
" ('PDS_VERSION_ID', 'PDS3')\n",
" ('RECORD_TYPE', 'FIXED_LENGTH')\n",
" ('RECORD_BYTES', 3920)\n",
" ('FILE_RECORDS', 9)\n",
" ('LABEL_REVISION_NOTE',\n",
" '2003-11-19, S. Slavney (GEO); 2005-09-25, S. Murchie (JHU/APL); 2007-03-09, '\n",
" 'E. Malaret (ACT Corp.); 2007-09-14, C. Hash (ACT Corp)')\n",
" ('^IMAGE', 't1865_mrrde_70n185_0256_1_cropped.img')\n",
" ('DATA_SET_ID', 'MRO-M-CRISM-5-RDR-MULTISPECTRAL-V1.0')\n",
" ('PRODUCT_ID', 'T1865_MRRDE_70N185_0256_1')\n",
" ('INSTRUMENT_HOST_NAME', 'MARS RECONNAISSANCE ORBITER')\n",
" ('SPACECRAFT_ID', 'MRO')\n",
" ('INSTRUMENT_NAME', 'COMPACT RECONNAISSANCE IMAGING SPECTROMETER FOR MARS')\n",
" ('INSTRUMENT_ID', 'CRISM')\n",
" ('TARGET_NAME', 'MARS')\n",
" ('PRODUCT_TYPE', 'MAP_PROJECTED_MULTISPECTRAL_RDR')\n",
" ('PRODUCT_CREATION_TIME',\n",
" datetime.datetime(2007, 12, 22, 16, 50, 47, 432000, tzinfo=datetime.timezone.utc))\n",
" ('START_TIME', 'N/A')\n",
" ('STOP_TIME', 'N/A')\n",
" ('SPACECRAFT_CLOCK_START_COUNT', 'N/A')\n",
" ('SPACECRAFT_CLOCK_STOP_COUNT', 'N/A')\n",
" ('PRODUCT_VERSION_ID', '1')\n",
" ('PRODUCER_INSTITUTION_NAME', 'APPLIED PHYSICS LABORATORY')\n",
" ('SOFTWARE_NAME', 'PIPE_create_crism_mrdr_product')\n",
" ('SOFTWARE_VERSION_ID', '12.21.07')\n",
" ('MRO:WAVELENGTH_FILE_NAME', 'T1865_MRRWV_70N185_0256_1.TAB')\n",
" ('IMAGE',\n",
" {'BANDS': 1,\n",
" 'BAND_NAME': ['Solar longitude, deg',\n",
" 'Solar distance, AU',\n",
" 'Observation ID, VNIR',\n",
" 'Observation ID, IR',\n",
" 'Ordinal counter, VNIR',\n",
" 'Ordinal counter, IR',\n",
" 'Column number, VNIR',\n",
" 'Column number, IR',\n",
" 'Line, or frame number, VNIR',\n",
" 'Line, or frame number, IR',\n",
" 'INA at areoid, deg',\n",
" 'EMA at areoid, deg',\n",
" 'Phase angle, deg',\n",
" 'Latitude, areocentric, deg N',\n",
" 'Longitude, areocentric, deg E',\n",
" 'INA at surface from MOLA, deg',\n",
" 'EMA at surface from MOLA, deg',\n",
" 'Slope magnitude from MOLA, deg',\n",
" 'MOLA slope azimuth, deg clkwise from N',\n",
" 'Elevation, meters relative to MOLA',\n",
" 'Thermal inertia, J m^-2 K^-1 s^-0.5',\n",
" 'Bolometic albedo',\n",
" 'Local solar time, hours',\n",
" 'Spare'],\n",
" 'BAND_STORAGE_TYPE': 'BAND_SEQUENTIAL',\n",
" 'LINES': 10,\n",
" 'LINE_SAMPLES': 980,\n",
" 'SAMPLE_BITS': 32,\n",
" 'SAMPLE_TYPE': 'PC_REAL'})\n",
" ('IMAGE_MAP_PROJECTION',\n",
" {'A_AXIS_RADIUS': Quantity(value=3396, units='KM'),\n",
" 'B_AXIS_RADIUS': Quantity(value=3396, units='KM'),\n",
" 'CENTER_LATITUDE': Quantity(value=67.5000001, units='DEGREE'),\n",
" 'CENTER_LONGITUDE': Quantity(value=185.0, units='DEGREE'),\n",
" 'COORDINATE_SYSTEM_NAME': 'PLANETOCENTRIC',\n",
" 'COORDINATE_SYSTEM_TYPE': 'BODY-FIXED ROTATING',\n",
" 'C_AXIS_RADIUS': Quantity(value=3396, units='KM'),\n",
" 'EASTERNMOST_LONGITUDE': Quantity(value=9.9999999, units='DEGREE'),\n",
" 'FIRST_STANDARD_PARALLEL': 'N/A',\n",
" 'LINE_FIRST_PIXEL': 1,\n",
" 'LINE_LAST_PIXEL': 1280,\n",
" 'LINE_PROJECTION_OFFSET': 18560.0,\n",
" 'MAP_PROJECTION_ROTATION': 0.0,\n",
" 'MAP_PROJECTION_TYPE': 'EQUIRECTANGULAR',\n",
" 'MAP_RESOLUTION': Quantity(value=256, units='PIXEL/DEGREE'),\n",
" 'MAP_SCALE': Quantity(value=0.231528833585, units='KM/PIXEL'),\n",
" 'MAXIMUM_LATITUDE': Quantity(value=72.5, units='DEGREE'),\n",
" 'MINIMUM_LATITUDE': Quantity(value=67.5000001, units='DEGREE'),\n",
" 'POSITIVE_LONGITUDE_DIRECTION': 'EAST',\n",
" 'REFERENCE_LATITUDE': 'N/A',\n",
" 'REFERENCE_LONGITUDE': 'N/A',\n",
" 'SAMPLE_FIRST_PIXEL': 1,\n",
" 'SAMPLE_LAST_PIXEL': 980,\n",
" 'SAMPLE_PROJECTION_OFFSET': 47360.0,\n",
" 'SECOND_STANDARD_PARALLEL': 'N/A',\n",
" 'WESTERNMOST_LONGITUDE': Quantity(value=360.0, units='DEGREE'),\n",
" '^DATA_SET_MAP_PROJECTION': 'MRR_MAP.CAT'})\n",
"])"
]
},
"execution_count": 14,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"header"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": []
}
],
"metadata": {
Expand Down
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