Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
WhoisDonlee authored Apr 29, 2024
1 parent 386105c commit f47a264
Showing 1 changed file with 8 additions and 1 deletion.
9 changes: 8 additions & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,9 @@
BenchAMRking is a platform where users can access and explore a range of best-practice tools, workflows and data for the prediction of AMR genes from WGS data. The workflows have been implemented in Galaxy to facilitate easy access and use of AMR gene prediction bioinformatics tools for researchers. BenchAMRking workflows are free with supporting self-learning training material.

# Run workflow on Galaxy.
First, create an account on [EU galaxy](https://usegalaxy.eu/login/start?redirect=None) and log in.

The workflows are available on [WorkflowHub](https://workflowhub.eu). The main page contains links to the WorkflowHub repository for each workflow:
The workflows are available on [WorkflowHub](https://workflowhub.eu). The main page contains links to the WorkflowHub repository for each workflow:
![step 1](assets/readme/step1.png)
Navigate to "View on WorkflowHub" toe view the workflow repository.

Expand All @@ -19,6 +20,12 @@ Select the input data and run the workflow.
![step4](assets/readme/step4.png)




---



# Extra workflow info
## WF2: Sciensano
[doi.org/10.1099/mgen.0.000531](https://doi.org/10.1099/mgen.0.000531)
Expand Down

0 comments on commit f47a264

Please sign in to comment.