Merge pull request #1274 from thewtex/itkwasm-pixi

itkwasm pixi

packages/core/python/itkwasm/.gitattributes

@@ -0,0 +1,2 @@
+# GitHub syntax highlighting
+pixi.lock linguist-language=YAML linguist-generated=true

packages/core/python/itkwasm/.gitignore

@@ -1 +1,6 @@
 dist/
+pyodide/
+
+# pixi environments
+.pixi
+*.egg-info

packages/core/python/itkwasm/itkwasm/__init__.py

@@ -1,12 +1,12 @@
 """itkwasm: Python interface to itk-wasm WebAssembly modules."""
 
-__version__ = "1.0b179"
+__version__ = "1.0b180"
 
 from .interface_types import InterfaceTypes
 from .image import Image, ImageType, ImageRegion
 from .point_set import PointSet, PointSetType
 from .mesh import Mesh, MeshType
-from .transform import Transform, TransformType, TransformParameterizations
+from .transform import TransformList, Transform, TransformType, TransformParameterizations
 from .polydata import PolyData, PolyDataType
 from .binary_file import BinaryFile
 from .binary_stream import BinaryStream
@@ -43,6 +43,7 @@
     "MeshType",
     "PolyData",
     "PolyDataType",
+    "TransformList",
     "Transform",
     "TransformType",
     "TransformParameterizations",

packages/core/python/itkwasm/itkwasm/transform.py

@@ -1,6 +1,6 @@
 from dataclasses import dataclass, field
 from enum import Enum
-from typing import Sequence, Union, Dict, Optional
+from typing import Sequence, Union, Dict, Optional, List
 
 try:
     from numpy.typing import ArrayLike
@@ -62,4 +62,6 @@ class Transform:
 
     def __post_init__(self):
         if isinstance(self.transformType, dict):
-            self.transformType = TransformType(**self.transformType)
+            self.transformType = TransformType(**self.transformType)
+
+TransformList = List[Transform]

packages/core/python/itkwasm/pyproject.toml

@@ -15,11 +15,11 @@ classifiers = [
     'Intended Audience :: Developers',
     'Intended Audience :: Science/Research',
     'Programming Language :: Python :: 3',
-    'Programming Language :: Python :: 3.8',
     'Programming Language :: Python :: 3.9',
     'Programming Language :: Python :: 3.10',
     'Programming Language :: Python :: 3.11',
     'Programming Language :: Python :: 3.12',
+    'Programming Language :: Python :: 3.13',
 ]
 keywords = [
     "itk",
@@ -28,44 +28,64 @@ keywords = [
 ]
 dynamic = ["version"]
 
-requires-python = ">=3.8"
+requires-python = ">=3.9"
 dependencies = [
     "numpy",
     "typing_extensions",
     "platformdirs; sys_platform != \"emscripten\"",
     "wasmtime >= 13.0.2; sys_platform != \"emscripten\"",
-    "importlib_metadata; python_version < \"3.10\"",
+    "importlib_metadata; python_version < \"3.10\"", "dask[array]>=2024.11.2,<2025",
 ]
 
 [project.urls]
 Home = "https://itkwasm.readthedocs.io"
 Source = "https://github.com/InsightSoftwareConsortium/ITK-Wasm"
 Issues = "https://github.com/InsightSoftwareConsortium/ITK-Wasm/issues"
 
-[tool.hatch.envs.default]
-dependencies = [
-    "itk>=5.4.0",
-    "pytest >=2.7.3",
-    "pytest-pyodide",
-    "pyodide-py",
-    "dask[array]",
-    "test_accelerator @ {root:uri}/test/test-accelerator",
-]
-
-[tool.hatch.envs.default.scripts]
-test = [
-    "hatch build -t wheel",
-    "pytest --dist-dir=./dist --rt=chrome",
-]
-download-pyodide = [
-  "curl -L https://github.com/pyodide/pyodide/releases/download/0.26.2/pyodide-0.26.2.tar.bz2 -o pyodide.tar.bz2",
-  "tar xjf pyodide.tar.bz2",
-  "rm -rf dist pyodide.tar.bz2",
-  "mv pyodide dist",
-]
-
 [tool.hatch.version]
 path = "itkwasm/__init__.py"
 
 [tool.black]
 line-length = 120
+
+[tool.pixi.project]
+channels = ["conda-forge"]
+platforms = ["win-64", "linux-64", "linux-aarch64", "osx-arm64"]
+
+[tool.pixi.dependencies]
+python = "3.13.*"
+hatch = ">=1.13.0,<2"
+pip = ">=24.2,<25"
+pytest = ">=8.3.3,<9"
+
+[tool.pixi.pypi-dependencies]
+itkwasm = { path = ".", editable = true }
+pyodide-py = ">=0.26.3, <0.27"
+pytest-pyodide = ">=0.58.3, <0.59"
+itk = ">=5.4.0"
+test_accelerator = { path = "test/test-accelerator", editable = true }
+
+[tool.pixi.tasks.build]
+cmd = "hatch build"
+description = "Build package wheels"
+
+[tool.pixi.tasks.download-pyodide]
+cmd = '''curl -L https://github.com/pyodide/pyodide/releases/download/0.26.3/pyodide-0.26.3.tar.bz2 -o pyodide.tar.bz2 &&
+  tar xjf pyodide.tar.bz2 &&
+  rm pyodide.tar.bz2'''
+outputs = ["pyodide"]
+description = "Download Pyodide"
+
+[tool.pixi.tasks.test]
+cmd = '''mkdir -p dist/pyodide &&
+  cp -r pyodide dist/ &&
+  hatch build -t wheel ./dist/pyodide/ &&
+  pytest --dist-dir=./dist/pyodide --rt=chrome'''
+depends-on = ["download-pyodide"]
+description = "Run tests"
+
+[tool.pixi.tasks.publish]
+cmd = '''rm -rf dist &&
+  hatch build &&
+  hatch publish'''
+description = "Publish package wheels"

packages/transform-io/pixi.toml

@@ -84,7 +84,7 @@ pillow = ">=10.4.0,<12"
 pyodide-py = ">=0.26.3, <0.27"
 pytest-pyodide = ">=0.58.3, <0.59"
 itk-webassemblyinterface = ">=1.0b175, <2"
-itkwasm = ">=1.0b179, <2"
+itkwasm = ">=1.0b180, <2"
 
 [feature.python.tasks.test-wasi]
 cmd = "pytest"