This release adds a new couple of command-line options for handling non-ACGTN
bases in FASTQ data and back-ports a few minor fixes from the development
branch.
Added
- Added support for converting Uracils (U) in input data to Thymine (T) via the
--convert-uracils
flag. - Added support for replacing IUPAC-encoded degenerate bases with Ns via the
--mask-degenerate-bases
flag. - Added DESTDIR support to
make install
.
Fixed
- Improved progress timer accuracy, so updates occur closer to every 1M reads.
Changed
- Minor improvements to
--help
text and documentation.