The new Loris Data Query Tool.
Before using this code, you must have the following prerequisites installed
- CouchDB >= 1.2 (http://couchdb.apache.org)
Create a database on your local CouchDB instance
curl -X PUT $YOURCOUCHDBADMIN:$YOURCOUCHADMINPASS@127.0.0.1:5984/$YOURDATABASENAME
Clone the code from the server http://couchdb.loris.ca:5984/dataquerytool-$VERSION where $VERSION
is separated by underscores rather than dots (because dots are not allowed in CouchDB database names.)
Example:
curl -H 'Content-Type: application/json' -X POST http://$YOURCOUCHDBADMIN:$YOURCOUCHADMINPASS@$YOURSERVERNAME:5984/_replicate -d '{"source":"http://couchdb.loris.ca:5984/dataquerytool-1_0_0", "target":"$YOURDATABASENAME"}'
You will need the following dependency:
First, create a CouchDB database using Futon (http://127.0.0.1:5984/_utils/index.html). In the following example, the database is named "dqg".
Next, clone this repository:
git clone [email protected]:aces/Data-Query-Tool.git
Finally, push to CouchDB using erica
cd Data-Query-Tool
erica push http://adminuser:[email protected]:5984/dqg
Visit http://127.0.0.1:5984/dqg/_design/DQG-2.0/_rewrite/ to ensure code was pushed.
Amend the section of your LORIS config.xml
<CouchDB>
<SyncAccounts>true</SyncAccounts>
<database>dqg</database>
<hostname>localhost</hostname>
<port>5984</port>
<admin>adminuser</admin>
<adminpass>adminpass</adminpass>
</CouchDB>
In your Loris tools directory run the CouchDB_Import_*
scripts
cd $lorisroot/tools
# Import the base candidate data
php CouchDB_Import_Demographics.php
# Import the Loris instrument data
# This step is optional and not required if
# only the MRI portion of Loris is used
php CouchDB_Import_Instruments.php
# Import the Loris MRI data
# This step is optional and not required
# if the MRI portion of Loris isn't installed
php CouchDB_Import_MRI.php