better starting value for HMC clock scale

beast-dev · Oct 10, 2024 · 1d511b1 · 1d511b1
1 parent 37ae252
commit 1d511b1
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/dr/app/beauti/generator/ClockModelGenerator.java b/src/dr/app/beauti/generator/ClockModelGenerator.java
@@ -283,7 +283,7 @@ public void writeBranchRatesModel(PartitionClockModel clockModel, XMLWriter writ
                         writeParameter(null, 1, 1.0, 0.0, Double.NaN, writer);
                         writer.writeCloseTag("mean");
                         writer.writeOpenTag("stdev");
-                        writeParameter(null, 1, 1.0, 0.0, Double.NaN, writer);
+                        writeParameter(null, 1, 0.1, 0.0, Double.NaN, writer);
                         writer.writeCloseTag("stdev");
 
                         writer.writeCloseTag(LogNormalDistributionModelParser.LOGNORMAL_DISTRIBUTION_MODEL);